CK934526

Overview
NameCK934526
Unique NameCK934526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_MYCPN (Probable NADP-dependent alcohol dehydrogenase OS=Mycoplasma pneumoniae GN=adh PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15
Identity = 64/216 (29.63%), Postives = 98/216 (45.37%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV---ALEPG-----------------ISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P  GP D ++R  AV  C SDVH   T+       +  MV+GHE  GV+++VGSEVK+   GDRV   A+ P                  +  W+  + K G +      ++F      G+LA            +P+ + L +  M  + +  G HA   A+I     +    AGP+GL+ + GA   GA RI++VD     + +AK  GA + +
Sbjct:   20 PVCGPNDAIIRPLAVAPCTSDVH---TVWEGGIGERHNMVLGHEGCGVVDEVGSEVKSFKVGDRVLVAAITPEWNSVNAQAGYPMHSGGMLGGWKFSNVKDGMF-----AEYFHVNDAEGNLA-----------LMPEGMDLADACMLSDMIPTGFHANELADIQYGVALSFFCAGPVGLMAIAGAALKGAGRIIVVDSRPDIVEIAKAYGATDYI 216          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14
Identity = 62/204 (30.39%), Postives = 95/204 (46.57%), Query Frame = 1
Query:  235 SLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEIKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            S G  DV++++   GIC SD+H +K   + A +    P+V GHE AGV+ + G  V     GD+V +   + SC  CD C  G  N CP + F            +G  ++ VV       + P+ + L++GA  +C  ++V           P  +V ++G G +G V +  A+AFG    VI      R    + LGAD  V
Sbjct:   27 STGDDDVVIKILYCGICHSDLHSIKNEWKNATY----PLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVISSSPGKRQEALERLGADAFV 226          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14
Identity = 68/229 (29.69%), Postives = 99/229 (43.23%), Query Frame = 1
Query:  163 GEEVNMAAWLMGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEIKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            GEE          ++  + PF +   S G  DV +++   GIC SD+H +K           P+V GHE AGV+ +VG  V     GDRV +   + SC  C+ C  G  N CPE  F            +G  ++ VV         P+ + L+ GA  +C  ++V           P  +V ++G G +G V +  ARAFG    VI      +    + LGAD  V
Sbjct:   11 GEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIY---PLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFV 236          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: DOIAD_STRKN (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces kanamyceticus GN=kanE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14
Identity = 63/199 (31.66%), Postives = 92/199 (46.23%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS---EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI 813
            ++P+  P + LV +    ICGSD   L   R        P+V GHE +G + ++       ++LV G  V  +   +C  C  C  G   LC  ++        G+ A  +  P D    LPD +SL      EPL+V L+A   A + P   V +MGAG IGL+ M  AR  G    V+ +    R +VA +LGA  +
Sbjct:   18 DVPTPRPGEALVHIAYNSICGSD---LSLYRGVWHGFGYPVVPGHEWSGTVVEINGANGHDQSLV-GKNVVGDLTCACGNCAACGRGTPVLCENLQELGFTK-DGACAEYMTIPVDNLRPLPDALSLRSACQVEPLAVALNAVSIAGVAPGDRVAVMGAGGIGLMLMQVARHLGGEVTVVSEPVAERRAVAGQLGATEL 211          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: DOIAD_STRFR (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces fradiae GN=neoA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14
Identity = 56/192 (29.17%), Postives = 84/192 (43.75%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 801
            ++P+  P + LVR+    +CGSD+ + K +         P+V GHE +G +  V       + G  V  +   SC  C HC  G   LC ++         G+ A  +  P      LPD + L      EPL+V L+A  R  + P   V +MGAG IGL+ +   R  G     + +    R + A  LG
Sbjct:   18 DIPAPAPGEALVRVAYNSVCGSDLSFYKGVWHG---FTYPVVPGHEWSGSVVDVNGPRGADLVGRNVVGDLTCSCGTCAHCAAGTPTLCEDLGELGFTR-DGACAEYMTVPVANLRPLPDTLPLRTACQVEPLAVALNAVDRLGVTPGEKVAVMGAGGIGLLLVQAVRLRGGTVTAVAEPVPERRAAALALG 205          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14
Identity = 64/210 (30.48%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            L I+   +P  GP  VL++ +A G+C +D+H  K     D+ V+   P + GHE  G + K+G+EV  L  GDRV + P +  +C  C  C+ G   LC   +      V G+ A   +   D   +LP    LE G     L  G+      +   + P   VL+ G G +G + +  A+A G   +   D+   +L++A++LGAD +V
Sbjct:   15 LVIEEVPVPQPGPGQVLIKYEATGVCHTDLHAAK----GDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGV-PWLHTACGCCTPCRTGWETLCGSQQNTGY-SVDGTFAQYGLADPDFVGRLP--ARLEFGPAAPVLCAGVTVYKGLKETEVRPGEWVLVSGIGGLGHMAVQYAKAMGM-HVAAADIFPDKLALAEKLGADLVV 215          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.147e-14
Identity = 65/219 (29.68%), Postives = 95/219 (43.38%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVH-------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR-RANIGPETN---------VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            +P  GP +V   +    +C +D+ Y +     +F    P ++GHE AG +E VG  V ++ PGD V L     C +C  CK GR   C    F AT  +              G+ A++ +  A  C K+            +P   GL  C   A +G   N         V ++G G +G   + GAR  GA +I+ VD D  +L  A ELGA + V
Sbjct:   23 IPDPGPSEVTALIATCAVCHTDLTYREGGINDEF----PFLLGHEAAGTVESVGEGVDSVQPGDYVVLNWRAVCGQCRACKRGRPQYCFS-TFNATQKMTLTDGTELTPALGIGAFADKTLVHAGQCTKV--------DPAADPAVAGLLGCGVMAGLGAAVNTGAVSRGDSVAVIGCGAVGDAVIAGARLAGANKIIAVDRDAKKLEWATELGATHTV 228          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.147e-14
Identity = 60/204 (29.41%), Postives = 93/204 (45.59%), Query Frame = 1
Query:  223 FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEI------KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 807
            F   + G  DV  ++   GIC +D+   K       +   P+V GHE  GV+ +VG++VK    GD+V +     SC  CD C  G  N CP++      K F     HG  ++ +V   D   ++PDN+ L+  A  +C  ++V           P  ++ ++G G +G V +  A+A G    VI   +  R      LGAD
Sbjct:   26 FSRRATGEKDVRFKVLFCGICHTDLSMAKN---EWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGAD 226          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.147e-14
Identity = 62/201 (30.85%), Postives = 101/201 (50.25%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV--KEPMVIGHECAGVIEKVGSEVK--TLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 807
            +P  GP ++LV+M+  G+C +D+H +K     D+ +  K P++ GHE AGV+   G  VK      GDR  ++    SC  C+ C      LCP     +   V G+     +  A L  K+PDNV L+  A  +C  ++V     + +   P   V I+GA G +G +    A+A G  R + +D  D + ++ ++LGA+
Sbjct:   26 VPKPGPDEILVKMRYSGVCHTDLHAMK----GDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHAS-LSGYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITV-YKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMGL-RTIAIDSGDEKKAMCEQLGAE 219          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: DOIAD_STRRI (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces ribosidificus GN=rbmC PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.663e-14
Identity = 54/192 (28.12%), Postives = 83/192 (43.23%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 801
            ++P   P + LVR+    +CGSD+ + K +         P+V GHE +G +  V   +   + G  V  +  +SC  C HC      LC ++         G+ A  +  P     +LPD + L      EPL+V L+A  R  +     V +MGAG IGL+     R  G     + +    R + A  LG
Sbjct:   18 DIPDPAPGEALVRIAYNSVCGSDLSFYKGVWHGSTY---PVVPGHEWSGTVVDVNGPLGAELIGTNVVGDLTVSCGTCAHCTARTPTLCEDLGELGFTR-DGACAEYMTIPVGNLRRLPDTLPLRAACQVEPLAVALNAVDRLGVTAGEKVAVMGAGGIGLLLAQAVRLRGGSVTAVAEPVPERRAAALALG 205          
The following BLAST results are available for this feature:
BLAST of CK934526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
ADH_MYCPN9.639e-1529.63Probable NADP-dependent alcohol dehydrogenase OS=M... [more]
CADH5_ORYSJ1.259e-1430.39Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH3_ORYSJ1.259e-1429.69Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
DOIAD_STRKN1.644e-1431.662-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
DOIAD_STRFR1.644e-1429.172-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADHA_RHIME1.644e-1430.48Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
FADH_AMYME2.147e-1429.68NAD/mycothiol-dependent formaldehyde dehydrogenase... [more]
CADH7_ARATH2.147e-1429.41Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
ADH3_EMENI2.147e-1430.85Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
DOIAD_STRRI3.663e-1428.132-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004258_A12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934526 ID=CK934526; Name=CK934526; organism=Citrus sinensis; type=EST; length=819bp
GCGGGGGCGGCCNNNTCAAATCATATCCCATANNNAGAATCAGAATAAAT
GGTAGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTG
TTTTTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGA
GAAAAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGT
CAACACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATG
ATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCAT
TATCTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGT
GATTGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGA
AGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGC
TGGCGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGAT
AAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGG
TGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAG
GAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCG
TGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCA
TAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATT
GTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGG
TGCAGATAATATTGTTAAA
back to top