CK934527

Overview
NameCK934527
Unique NameCK934527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  260 ARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSS-----GMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 583
            A +DW E+  +H FK ++PG               L I G+   E + +N  WH  ER +       F RR  LPENVK+DQ+KA +ENGVLTV VPK   ++ + V+ + I+
Sbjct:   22 ALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  230 FPPE-TSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISG-------QRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 583
            FPP+  SA   A +DW ETP +H  + ++PGL              L + G       ++  ERE K+  WH  ER    F+R   LP  V+++QI+AS++NGVLTV VPK     +   + I +S
Sbjct:   19 FPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE-KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 2
Query:  212 SAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 580
            +A S  +  +  A+     D KE P ++ F  D+PGL              L ISG+R  E E +   + R ER  G F R+F LPEN   D I A  ++GVLTVTV K+        K IE+
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEV 152          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 2
Query:  200 SGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 580
            +G   + +  +  +  A+     D KE P A+AF  D+PGL              L +SG+R  E  + +  + R ER  G F R+F LP+N  +D++ A   +GVLTVTV K+        K IE+
Sbjct:   35 TGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEV 161          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 45/115 (39.13%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  239 ETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWH-RWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 580
            +  A+     D KE P A+AF  D+PGL              L ISG+R   RE++ D  + R ER  G F R+F LP+N  MD+I A   +GVLTVTV K+        K IE+
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGER--RREEREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEV 158          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HS185_ARATH (18.5 kDa class IV heat shock protein OS=Arabidopsis thaliana GN=HSP18.5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 60/183 (32.79%), Postives = 84/183 (45.90%), Query Frame = 2
Query:  101 MSLIPSFFGNRR-----SSVFDPFSLDVWDPFRDFPLPSGYSS----AVSSQ-FPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTV-----------PKVEEARKANVKAIEISG 586
            MS+IP    NRR       +++PF L   + F DFP P+ + S    ++S + FP  +S+ VN +++W ETP AH FKA LPG+              LQI                        F  RF+LP N   DQ+ A ME+  L V V           P++EE R  NV+ +EI+G
Sbjct:    1 MSMIP--ISNRRRLSPGDRIWEPFEL--MNTFLDFPSPALFLSHHFPSLSREIFPQTSSSTVNTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQIC------------------TGDNKFMSRFKLPNNALTDQVTAWMEDEFLVVFVEKDASSSPPQLPEIEENR--NVRVVEITG 159          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSPC2_RICFE (Small heat shock protein C2 OS=Rickettsia felis GN=hspC2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 48/153 (31.37%), Postives = 70/153 (45.75%), Query Frame = 2
Query:  128 NRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 586
            N   ++FD F    ++ F  FP    YSS+      P T        D  ET   ++ + +LPG+              L I GQ+  + E+KN  +H  ER  G F R   LP N+  D I A  ENG+L +T+PK E+ +    + IE+ G
Sbjct:   22 NHLDNIFDDF----FNEFYTFP----YSSSTEKNLIPRT--------DISETDSGYSLEVELPGINQKDIDINIDNHI-LTIKGQKEEKSEEKNKNYHMRERYYGSFQRSISLPANINDDAINARFENGILHITIPKKEQGK---TRKIEVKG 154          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 46/128 (35.94%), Postives = 61/128 (47.66%), Query Frame = 2
Query:  200 SGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWH-RWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 580
            S  SSA S  F  +  A+     D KE P ++ F  D+PGL              L ISG+R  E E+K    + R ER  G   R+F LPEN   ++I A  ++GVLTVTV  V        + IE+
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEV 152          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 2
Query:  209 SSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 580
            +S  S  +  +  A+     D KE P ++ F  D+PGL              L ISG+R  E E +   + R ER  G F ++F LPE+   D+I A  ++GVLTVTV K+        K I++
Sbjct:   34 NSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQV 157          
BLAST of CK934527 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = 2
Query:  203 GYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQR----GIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 580
            G +   +  +  +  A+     D K+ P A+AF  D+PGL              L ISG+R    G E ++++  + R ER  G F R+F LP+N  +D+I A  ++GVLTVTV K+        K IE+
Sbjct:   34 GATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163          
The following BLAST results are available for this feature:
BLAST of CK934527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS157_ARATH3.431e-1438.0515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP16_ORYSJ3.793e-1335.7116.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_SOLPE1.441e-1235.7717.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP22_MAIZE2.459e-1232.2817.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE4.194e-1239.1317.5 kDa class II heat shock protein OS=Zea mays P... [more]
HS185_ARATH4.194e-1232.7918.5 kDa class IV heat shock protein OS=Arabidopsi... [more]
HSPC2_RICFE7.154e-1231.37Small heat shock protein C2 OS=Rickettsia felis GN... [more]
HSP21_IPONI9.343e-1235.9417.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN9.343e-1233.0617.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ1.220e-1133.0818.0 kDa class II heat shock protein OS=Oryza sati... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004258_B02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934527 ID=CK934527; Name=CK934527; organism=Citrus sinensis; type=EST; length=790bp
GGGGTCTGAAGAAAGGCAACTTTCCTGTAATCATTTACATATCCTACATT
CTGCAACAGCCACTTTTCCATTAGTTCGTAACCGAAAAGAAAACTAGAAA
ATGTCGCTAATTCCAAGCTTCTTCGGCAACCGACGCAGCAGTGTGTTCGA
TCCATTCTCGCTCGACGTTTGGGATCCATTCAGGGACTTCCCTTTGCCGT
CTGGCTATTCGTCTGCGGTGTCGTCTCAGTTCCCTCCAGAAACCTCTGCT
GTCGTTAACGCCCGCGTGGACTGGAAGGAAACCCCGGAAGCCCACGCGTT
CAAGGCCGATCTTCCGGGGCTGAGGAAAGAGGAAGTGAAGGTCGAGGTCG
AGGACGACAGGGTGCTTCAGATAAGCGGGCAGAGGGGGATCGAGAGGGAA
GACAAGAACGACACGTGGCATCGCTGGGAGCGCAGCAGCGGCATGTTCTC
CAGGAGGTTCAGGCTGCCCGAGAATGTGAAGATGGATCAGATTAAGGCTT
CCATGGAGAATGGTGTGCTCACTGTTACAGTCCCTAAGGTGGAGGAGGCC
AGGAAAGCCAATGTCAAGGCTATTGAAATTTCTGGCTGATAAATTGATAT
TTAATAAACGAAGATGATTTAAAATTTGTGTTGAATCCCGAGTGAGTCTG
TGGTTCATTACTTTTAGTTGAGTGTTGTCTTATGTGACGCCTACCATTTT
TGTGTGTCTTGTAATGGGATATGTAATTTTGTAACCCTGCGCGTCATTTG
ATCTTGTTTACAATGTATTCGTGCTCTTTAGAATTTAAAA
back to top