CK934531

Overview
NameCK934531
Unique NameCK934531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.141e-34
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNF 380
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CV+DP+WCLPGTI +TATNF
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNF 131          

HSP 2 Score: 62.3882 bits (150), Expect = 1.141e-34
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 2
Query:  413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R
Sbjct:  141 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRR 175          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.142e-34
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNF 380
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CVNDP+WCLPG++ +TATNF
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNF 124          

HSP 2 Score: 62.3882 bits (150), Expect = 1.142e-34
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 2
Query:  413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R
Sbjct:  134 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRR 168          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 3.291e-34
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  144 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATN 377
            G W +A ATFY              YGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WCLPG++ VTATN
Sbjct:   27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATN 104          

HSP 2 Score: 60.4622 bits (145), Expect = 3.291e-34
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2
Query:  413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            GGWCNPP+ HFD+++P F  I  YRAG+VPV+Y+R
Sbjct:  117 GGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRR 151          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.092e-33
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 3
Query:  129 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG-TIMVTATNF 380
            H  GG  G WINA ATFY              YGNLYSQGYG  TAALSTALF+ GLSCG+C+E+ CVNDP+WC+ G +I+VTATNF
Sbjct:   29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNF 115          

HSP 2 Score: 55.4546 bits (132), Expect = 2.092e-33
Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 2
Query:  413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            GG C+PP  HFDLSQP+++ IA Y++G++PV Y+R
Sbjct:  119 GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRR 153          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.325e-32
Identity = 45/78 (57.69%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNF 380
            GW + RATFY              YG+L+ QGYG  TAALSTALFNNG  CG+CYEI C + P+WCLPG+I +TATNF
Sbjct:   89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNF 166          

HSP 2 Score: 60.8474 bits (146), Expect = 1.325e-32
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  419 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            WCNPPQ+HFDLSQP+F  IA+Y+AGVVPV ++R
Sbjct:  178 WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRR 210          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.729e-32
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNF 380
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNF
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNF 134          

HSP 2 Score: 56.6102 bits (135), Expect = 1.729e-32
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 2
Query:  419 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R
Sbjct:  146 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRR 178          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.729e-32
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNF 380
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNF
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNF 128          

HSP 2 Score: 56.6102 bits (135), Expect = 1.729e-32
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 2
Query:  419 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R
Sbjct:  140 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRR 172          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.100e-31
Identity = 50/84 (59.52%), Postives = 55/84 (65.48%), Query Frame = 3
Query:  138 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND-PKWCLPG--TIMVTATNF 380
            G G W    ATFY              YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C  D  + CLPG  T+ VTATNF
Sbjct:   24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNF 107          

HSP 2 Score: 62.003 bits (149), Expect = 1.100e-31
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523
            FC          GGWCNPP++HFDL++P F  IA++ AG+VPV+++R A
Sbjct:  107 FCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVA 155          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.185e-30
Identity = 45/82 (54.88%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  132 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATN 377
            A G  GW +  ATFY              YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C      CL GT+ VTATN
Sbjct:   21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATN 101          

HSP 2 Score: 62.3882 bits (150), Expect = 1.185e-30
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 2
Query:  413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523
            GGWCNPP+ HFD+++P F  IAQ RAGVVPV Y+R A
Sbjct:  114 GGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVA 150          
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.543e-30
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNF 380
            GW+ A ATFY              YGNLY+ GY TNTAALSTALFN+G SCG CY+I C     P+WCL G +I +TATNF
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNF 107          

HSP 2 Score: 63.1586 bits (152), Expect = 1.543e-30
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 2
Query:  377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
            FC          GGWCNPP+ HFD++QP F  IA+Y+AG+VP+ YK+
Sbjct:  107 FCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKK 153          
The following BLAST results are available for this feature:
BLAST of CK934531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP25_ARATH1.141e-3459.74Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH1.142e-3458.44Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXPA2_ORYSJ3.291e-3460.26Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA5_ARATH2.092e-3360.92Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP24_ARATH1.325e-3257.69Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP26_ARATH1.729e-3258.44Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP22_ARATH1.729e-3258.44Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXPA6_ORYSJ1.100e-3159.52Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP11_ORYSJ1.185e-3054.88Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH1.543e-3055.56Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934531 ID=CK934531; Name=CK934531; organism=Citrus sinensis; type=EST; length=725bp
GGGGACTCAACTGCCTCACATTTCCTCTCTCTCTTTCTCTACTCTGCTTC
TGGGCTTCCAATTTCTCCAAGAAAATGTATTTTGCTGGGTTTTTCTCGTT
GGGTTTCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGT
GGATCAATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACT
ATGGGTGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAAC
GAACACTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTG
GGTCTTGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCC
GGCACCATTATGGTCACAGCTACCAATTTTGCCCACCGAACAACGCCCTC
CCCAACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCT
CTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCC
CTGTAGCTTACAAGAGGTATGCTCTCTTGGTTTTAAGCTCAACAAGTGGT
AATTAATGTTCGTTAACTAGAGATTAAAACCATACTCTTATATTGTCCCC
GCTTACTATTGCTCTAGTCTAGTGGCCCAATGCTTTTATTGATTGTGATT
TGTGGTCTAGCCCAAGATTTTACTTTATTTCCCACTAATTTATTCATGGT
GGTTTTTTTCCCCCAAAAAAAAAAA
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