CK934531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.326e-25 Identity = 38/78 (48.72%), Postives = 46/78 (58.97%), Query Frame = 3 Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATN 377 W A ATFY YGNLY+ GYGT+TAALST LF +G CG+CY+++CV C G+ I VTATN Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATN 113 HSP 2 Score: 61.2326 bits (147), Expect = 6.326e-25 Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCNPP+ HFDLS+P F +A +RAG+VPV Y+R Sbjct: 128 GGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRR 162
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.332e-25 Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 3 Query: 141 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATN 377 G W A ATFY YGN+Y GYG T ALSTALFN G +CG C+++KCV+ P C G+ +VTATN Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATN 107 HSP 2 Score: 60.8474 bits (146), Expect = 6.332e-25 Identity = 22/37 (59.46%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523 GGWCNPP+ HFDL++P F IA ++AG++PV+Y+R A Sbjct: 120 GGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVA 156
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 54/91 (59.34%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 141 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFAHRTTPSPT 407 GG W A ATFY YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG ++ VTATNF P+ Sbjct: 31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPS 121 HSP 2 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523 FC GGWCNPP+ HFDL+ PVF IA+YRAG+VP++Y+R A Sbjct: 112 FCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVA 160
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.817e-24 Identity = 40/80 (50.00%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATN 377 GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C P+WC G + +TATN Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATN 105 HSP 2 Score: 53.9138 bits (128), Expect = 1.817e-24 Identity = 18/35 (51.43%), Postives = 28/35 (80.00%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCNPP+ HFD+++P + I Y+AG++PV Y++ Sbjct: 118 GGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQ 152
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.002e-24 Identity = 35/78 (44.87%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 144 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATN 377 G W A ATFY YGNL++ GYG +TAALST LFN+G CG C++I C P + +VTATN Sbjct: 35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATN 112 HSP 2 Score: 60.4622 bits (145), Expect = 4.002e-24 Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCNPP+ HFD+++P F +A +RAG++PVAY+R Sbjct: 125 GGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRR 159
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.215e-24 Identity = 44/81 (54.32%), Postives = 45/81 (55.56%), Query Frame = 3 Query: 147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNF 380 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG CY I C D P C GT I VT TNF Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNF 102 HSP 2 Score: 50.8322 bits (120), Expect = 5.215e-24 Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCN + HFD+SQP +++I Y AG+VP+ Y++ Sbjct: 112 GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQ 146
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 52/91 (57.14%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 141 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFAHRTTPSPT 407 GGGW A ATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC G +I +TATNF P+ Sbjct: 28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPS 118
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.814e-24 Identity = 37/89 (41.57%), Postives = 45/89 (50.56%), Query Frame = 3 Query: 129 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATN 377 H N G G W A ATFY Y + +GYG T A+ST LF G CG+CYE+KCV+ P C G ++VTATN Sbjct: 31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATN 119 HSP 2 Score: 62.003 bits (149), Expect = 8.814e-24 Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCNPP++HFDLS P F IAQ +AG+VP++Y+R Sbjct: 132 GGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRR 166
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 52/93 (55.91%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 138 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC---VNDPKWCLPGTIMVTATNFAHRTTPSPT 407 GGGGW +A ATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C CLPG+++VTATNF P+ Sbjct: 60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPS 152 HSP 2 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 2 Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523 FC GGWCNPP+ HFD+SQPVFQ IA ++AG+VPV+Y+R A Sbjct: 143 FCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVA 191
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.708e-22 Identity = 40/80 (50.00%), Postives = 43/80 (53.75%), Query Frame = 3 Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNF 380 W+ ATFY YGNLY QGYG N AALST LFN+G SCG CY I C P WC G I VT TN+ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNY 102 HSP 2 Score: 50.8322 bits (120), Expect = 2.708e-22 Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCN + HFD+SQP +++I Y AG++P+ Y++ Sbjct: 112 GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQ 146 The following BLAST results are available for this feature:
BLAST of CK934531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934531 ID=CK934531; Name=CK934531; organism=Citrus sinensis; type=EST; length=725bpback to top |