CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1703 contig Csv1_Contig1703:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: OAC1_SCHPO (Mitochondrial oxaloacetate transport protein OS=Schizosaccharomyces pombe GN=oac1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.242e-18
Identity = 53/167 (31.74%), Postives = 88/167 (52.69%), Query Frame = 1
Query:   49 NPADVAMVRMQA-DGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQ 546
            +P  +   RMQ+   + P  Q+  YK + +A ++++++ GV  L+ G+   + R +  ++ QL  Y+  K MI    ++ +G+  H+TAS  +G          D +MTR+ N K        YK  +DC LKT+R+EG  ALYKGF   ++R  P T+     +EQ
Sbjct:  147 SPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMIEHYNLLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQK----NKELYKNPIDCILKTIRSEGFFALYKGFGAHLARIAPHTIFCLTFVEQ 309          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2534_RAT (Solute carrier family 25 member 34 OS=Rattus norvegicus GN=Slc25a34 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.051e-17
Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 1
Query:   49 NPADVAMVRMQAD--GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVA----SNPVDVIMTRVMNMKVV-AGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            +PA +   ++QA     +    +  ++ V+ A+  + RQ+G+  LWRG    V R  + +A+QLAT+   K  +  +      L     A+ A G+++S+A      P DV+ TR+ N  V  AGR   Y G  DC +KT + EGP+ALYKG  P   R GP T++     +++R
Sbjct:  136 SPAYLVKTQLQAQTGAAVAVGHQHQHQGVLSALETIWRQQGMLGLWRGVGAAVPRVTVGSAAQLATFTSAKAWVQDQQWF---LEDSWLATLAGGMISSIAVVAVMAPFDVVSTRLYNQPVDRAGRGQLYGGLTDCLVKTCQQEGPLALYKGVGPAYLRLGPHTILSMFFWDELR 307          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2534_MOUSE (Solute carrier family 25 member 34 OS=Mus musculus GN=Slc25a34 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.051e-17
Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = 1
Query:   49 NPADVAMVRMQAD--GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVA----SNPVDVIMTRVMNMKVV-AGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            +PA +   ++QA     +    +  ++ V+ A+  + RQ+G+  LWRG    V R  + +A+QLAT+   K  +  +      L      + A G+++S+A      P+DV+ TR+ N  V  AGR   Y G  DC +KT + EGP+ALYKG  P   R GP T++     +++R
Sbjct:  136 SPAYLVKTQLQAQTVATMAVGHQHQHQGVLSALETIWRQQGMLGLWRGVGGAVPRVTVGSAAQLATFTSAKAWVQDRQWF---LEDSWLVTLAGGMISSIAVVAVMTPLDVVSTRLYNQPVDRAGRGQLYGGLADCLVKTCQQEGPLALYKGLGPAYLRLGPHTILSMFFWDELR 307          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2535_DANRE (Solute carrier family 25 member 35 OS=Danio rerio GN=slc25a35 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 48/163 (29.45%), Postives = 87/163 (53.37%), Query Frame = 1
Query:   70 VRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLG-THVTASFAAGLVASVASNPVDVIMTRVMNMKV-VAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            ++ Q+   +    +  ++ + +A+  + +Q G+  LWRG+S  + R  + +A+QLAT+   KEM+    V  +G     ++A   + +V  +A  P DV+ TR+ N  V   G+   Y+G +DC  KT++ EG   LYKG   +  R GP T++  +   ++R
Sbjct:  129 LQSQSTSSIAVGHQYKHRGMTNALFAIHKQHGILGLWRGASAAIPRVSVGSAAQLATFSASKEMVNDLQVFSEGSWLIALSAGMISSVVVVLAMTPFDVVSTRLYNQPVDHLGKGMLYRGFVDCFSKTLKKEGMTGLYKGLGASYFRLGPHTILSLLFWNELR 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2534_DANRE (Solute carrier family 25 member 34 OS=Danio rerio GN=slc25a34 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.536e-16
Identity = 55/173 (31.79%), Postives = 85/173 (49.13%), Query Frame = 1
Query:   49 NPADVAMVRMQAD--GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMR--DGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPP-YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            +PA +    +QA     +    + N++ +  A+  + R+EGV  LWRG +  V R M+ +A+QLAT+   K+ I           L T + A+  +G+  S+   P DVI TR+ N  V   +    Y G +DC LK   AEG + LYKG  P   R  P T +  +  + +R
Sbjct:  140 SPAYLVKTHLQAQTVAAIAVGHQHNHQGMSSALVSIYRREGVCGLWRGVNGAVPRVMVGSATQLATFSSAKDWITHTQWFSPLSSLNT-LCAAVMSGVAVSIIMTPFDVISTRLYNQPVDQFKQGRLYCGFVDCLLKVCAAEGVLGLYKGMTPVFVRLAPHTTLSMLLWDVLR 311          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: MCFX_DICDI (Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAG-RDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLE 543
            NP ++  +RMQ  G   S ++ + K V+  +       G+  L++G++ T+ R +  +    + Y ++K  +  +     GL   +     AG +A+  S P DVI TR+   +V  G  DP YKG  DC  KT+++EGP AL+KG +P +    P   +  V  E
Sbjct:  138 NPMELVKIRMQVSGL--SGKKASLKEVVSEL-------GIKGLYKGTASTLLRDVPFSMIYFSIYGRMKHNLTDQETGEIGLPKILLCGITAGSIAASVSTPFDVIKTRI---QVKPGPNDPHYKGIADCFRKTIQSEGPKALFKGVLPRVCIISPLFGITLVVYE 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH--VTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N  S++    QM+R+ G+ SLWRG+ + V +    +A +   Y+Q+K +I   G  ++ LG H  + A   AG++A  +  P++V+ TR+   K        Y+G LDC  K +  EG  A YKG++P +    P+  +     E ++
Sbjct:  250 PLDRLKVLMQVH-----ASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRII---GSDQETLGIHERLVAGSLAGVIAQSSIYPMEVLKTRMALRKT-----GQYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYAGIDLAVYETLK 405          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.053e-14
Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       + + N  S+++   QM+++ GVASLWRG+ + V +    TA +   Y+Q K+++ K G         +  S  AG  A  A  P++V+ TR+   K        Y G  DCA K +R EG  A YKG++P I    P+  +     E ++
Sbjct:  215 PLDRMKVFMQVH-----SSKTNKISLVNGFKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKKLLSKDGGKVQSHERFMAGSL-AGATAQTAIYPMEVMKTRLTLRKT-----GQYSGMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGIDLAVYETLK 370          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 52/173 (30.06%), Postives = 85/173 (49.13%), Query Frame = 1
Query:   52 PADVAMVRMQAD-GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAG----LVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLFVTLEQV 549
            P D A  R+ AD G+  S   R ++ + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+        VA V S P D +  R+M      G D  YKG +DC  K ++ EG  A +KG    + R   G F +VL+  L++V
Sbjct:  133 PLDFARTRLAADVGK--SGSEREFRGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKV 297          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 51/169 (30.18%), Postives = 81/169 (47.93%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH--VTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N  S++     M+R+ G  SLWRG+ + V +    +A +   Y+Q+K +I   G  ++ LG H    A   AG++A  +  P++V+ TR+   K        Y+G LDC  K +  EG  A YKG++P +    P+  +     E ++
Sbjct:  251 PLDRLKVLMQVH-----ASRSNNMSILGGFTHMIREGGFRSLWRGNGINVIKIAPESAIKFMAYEQIKRII---GSNQETLGIHERFVAGSLAGVIAQSSIYPMEVLKTRMALRKT-----GQYQGVLDCGKKILLQEGLSAFYKGYVPNMLGIIPYAGIDLAVYETLK 406          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
OAC1_SCHPO1.242e-1831.74Mitochondrial oxaloacetate transport protein OS=Sc... [more]
S2534_RAT1.051e-1732.57Solute carrier family 25 member 34 OS=Rattus norve... [more]
S2534_MOUSE1.051e-1732.00Solute carrier family 25 member 34 OS=Mus musculus... [more]
S2535_DANRE5.770e-1629.45Solute carrier family 25 member 35 OS=Danio rerio ... [more]
S2534_DANRE7.536e-1631.79Solute carrier family 25 member 34 OS=Danio rerio ... [more]
MCFX_DICDI3.166e-1430.12Mitochondrial substrate carrier family protein X O... [more]
SCMC2_XENTR4.135e-1430.77Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_DANRE7.053e-1431.14Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT3_BOVIN1.571e-1330.06ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
SCMC2_XENLA2.052e-1330.18Calcium-binding mitochondrial carrier protein SCaM... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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