CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1703 contig Csv1_Contig1703:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH--VTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N   +I    QM+R+ G  SLWRG+ + V +    +A +   Y+Q+K ++   G  ++ L  H  + A   AG +A  +  P++V+ TR+   K        Y G LDCA + +  EG  A YKG+IP +    P+  +     E ++
Sbjct:  206 PLDRLKVLMQVH-----ASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLV---GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKT-----GQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLK 361          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 45/167 (26.95%), Postives = 78/167 (46.71%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A + N  +++  +  M+ + G+ SLWRG+ + V +    +A +   Y+Q+K  IL +         HV   F AG +A   +  + +    V+  ++   R   YKG LDCA + +  EGP A Y+G++P +    P+  +     E ++
Sbjct:  205 PLDRLKVFMQVH-----ASKTNRLNILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKFMAYEQIKRAILGQQET-----LHVQERFVAGSLAGATAQTI-IYPMEVLKTRLTLRRTGQYKGLLDCARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLK 360          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH--VTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N   ++    QM+R+ G  SLWRG+ + V +    +A +   Y+Q+K ++   G  ++ L  H  + A   AG +A  +  P++V+ TR+   K        Y G LDCA + +  EG  A YKG+IP +    P+  +     E ++
Sbjct:  206 PLDRLKVLMQVH-----ASRSNNMCIVGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLV---GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKT-----GQYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLK 361          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 50/169 (29.59%), Postives = 79/169 (46.75%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLG--THVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N   +     QM+R+ G+ SLWRG+ + V +    +A +   Y+Q+K +I   G  ++ LG    + +   AG +A  +  P++V+ TR     +  GR   Y G  DCA    + EG  A YKG+IP +    P+  +     E ++
Sbjct:  206 PLDRLKVLMQVH-----ATRSNSMGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKRLI---GSNQETLGILERLVSGSLAGAIAQSSIYPMEVLKTR-----LALGRTGQYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLK 361          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ODC_SCHPO (Probable mitochondrial 2-oxodicarboxylate carrier OS=Schizosaccharomyces pombe GN=SPAC328.09 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 38/144 (26.39%), Postives = 67/144 (46.53%), Query Frame = 1
Query:  118 YKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            Y   +D   ++++QE + +L+ G   T+ R ++  A       +++  +         +  ++ A    G+  +  S P DVI +R+  +  +AG+ P Y  A    +   R EG  ALYKGF+P + R GP   +L V    V
Sbjct:  141 YNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2535_HUMAN (Solute carrier family 25 member 35 OS=Homo sapiens GN=SLC25A35 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 42/163 (25.77%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   70 VRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMR-DGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVA-GRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            ++ QA   +    +  ++ +  A+ ++ ++ G+  LWRG+   + R ++ +++QL T+   K+++ +  +         + A+  +G+   +A  P DV  TR+ N    A G+   Y+G LD  L+T R EG   +YKG   +  R GP T++     +Q+R
Sbjct:  130 LQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGALGGLPRVIVGSSTQLCTFSSTKDLLSQWEIFPPQSWKLALVAAMMSGIAVVLAMAPFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPHTILSLFFWDQLR 292          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD     A+R  +K + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+    +   VA + S P D +  R+M      G D  Y G LDC  K  R EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKAGAERE-FKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGSKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SFC1_YEAST (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae GN=SFC1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 51/173 (29.48%), Postives = 82/173 (47.40%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRN--YKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTA--SFAAGLVASVASNPVDVIMTRVMNMKVVA-GRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            NP +V  +R+QA    PS       Y + I A   ++++EGV++L+RG SLT  R      +    Y ++KE +     M D L +  T+     +G +   ++ P+D I TR+   K ++  +    K  +    + ++ EG  ALYKG  P + R  P   V F   E VR
Sbjct:  130 NPMEVVKIRLQAQHLTPSEPNAGPKYNNAIHAAYTIVKEEGVSALYRGVSLTAARQATNQGANFTVYSKLKEFLQNYHQM-DVLPSWETSCIGLISGAIGPFSNAPLDTIKTRLQKDKSISLEKQSGMKKIITIGAQLLKEEGFRALYKGITPRVMRVAPGQAVTFTVYEYVR 301          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD     A+R  +K + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+    +   VA + S P D +  R+M      G D  Y G LDC  K  R EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKAGAERE-FKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAG----LVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD     A+R  ++ + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+        VA + S P D +  R+M      G D  Y G LDC  K  R EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKAGAERE-FRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFALVLY 291          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCMC2_RAT1.018e-1230.18Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_HUMAN1.330e-1226.95Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_MOUSE1.330e-1229.59Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM2B_DANRE1.330e-1229.59Calcium-binding mitochondrial carrier protein SCaM... [more]
ODC_SCHPO1.330e-1226.39Probable mitochondrial 2-oxodicarboxylate carrier ... [more]
S2535_HUMAN1.737e-1225.77Solute carrier family 25 member 35 OS=Homo sapiens... [more]
ADT2_MOUSE1.737e-1230.12ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
SFC1_YEAST2.269e-1229.48Succinate/fumarate mitochondrial transporter OS=Sa... [more]
ADT2_RAT2.269e-1230.12ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_PONAB3.870e-1229.52ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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