CK934565

Overview
NameCK934565
Unique NameCK934565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.947e-17
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 2
Query:    5 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 355
            S +T+AG+ GY+ PEY  S + + K DVYSYGVV+LE+LTGK+P D       ++V WVK   K++   V D  L     +   E++Q L VA  C++  P  RPTM  V AM  EI
Sbjct:  953 SSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVK---KIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAMLSEI 1066          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.732e-17
Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 2
Query:   17 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH--AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 358
            +AG+ GY+ PE+    R + K DVYSYGVVLLE+LTGK P D    G  +LV WV+ H   K   S + DP L     +I  E+LQ L VA  C+ ++   RP M  V+AM  EI+
Sbjct:  927 MAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEIR 1042          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.793e-17
Identity = 54/136 (39.71%), Postives = 78/136 (57.35%), Query Frame = 2
Query:    5 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGG 409
            S+S +AG+ GY+ PEY  + R + K D+YS+GVV+LE++T KRP D  + G+ +LV WV      K I  V DP+L   D   + E+ + L+V   C    P  RP+M +V+ M +EI  G   DS   I  D+ G
Sbjct:  849 SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD-PELGEKDLVKWVCSTLDQKGIEHVIDPKL---DSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEI-GGGDEDSLHKIRDDKDG 979          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.148e-16
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 2
Query:   11 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 358
            +T+AG+ GY+ PEY  S + + K DVYSYGVV+LE+LTGK+P D       +LV WV+Q+      +V D  L         E++Q L  A  C++  P  RPTM  V AM KEI+
Sbjct:  954 NTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQNR--GSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLKEIK 1067          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 2
Query:   17 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 361
            L GT GY+PPEY Q++  + +GDVYS+GVV+LELLTGKRP +         LV WV    +  K  +VFD  L++E  N E  +L+ L +A  C++  P +RP + QV+   K I+A
Sbjct:  965 LVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFD-TLLRESGN-EEAMLRVLDIACMCVNQNPMKRPNIQQVVDWLKNIEA 1079          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2
Query:    5 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD-NNLVGWVKQHAKLK--ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 352
            S+S +AG+ GY+ PEY  + +   K D+YSYGV+LLE++TGKR  +  +FG+ N++V WV+   K K  + +V D  + +    I  E+ Q L +A  C    P  RP M  V+ + +E
Sbjct:  882 SMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE-PEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQE 999          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15
Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 2
Query:    5 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK--LKISDVFDPELMK-EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATD 400
            SVS +AG+ GY+ PEY  + + + K D+YS+GVVLLELLTGK P    + G  +L  W + H +     S++ DP L K ED  I   ++    +A  C    P  RPTM +V+ M  E    +G    ST  +D
Sbjct:  984 SVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQG-GDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLIESGERAGKVIVSTTCSD 1117          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15
Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = 2
Query:    8 VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 361
            V+ + GTPGYV PEYY +F+ + K DVYS+G+VLLEL+TGKR     D G+  N+V +V+   K+  I  V DP L  +  +      + + VA +C+ DR   RP   Q+++  K+  A
Sbjct:  738 VTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSS--NSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLA 855          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.828e-15
Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 2
Query:    5 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQST 388
            +V   AGT GY  PE+ +    S K DVYS G+++LELLTGK P +  +  D  L  WV    K +  ++VFD ELM+E  ++  ELL  L +A  C+D  P  RP   QV+   +EI+  + +++++T
Sbjct:  693 NVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSPGEPTNGMD--LPQWVASIVKEEWTNEVFDLELMRETQSVGDELLNTLKLALHCVDPSPAARPEANQVVEQLEEIRPETEVETETT 819          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 45/107 (42.06%), Postives = 73/107 (68.22%), Query Frame = 2
Query:   23 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQV 334
            GT GY+ PEYY++F+ + K DVYS+GVVLLE++T K+  D + +  D NLV ++ K   + ++++  DP L K    I+++ +Q L ++ASACL++R   RP+M +V
Sbjct:  533 GTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEV 639          
The following BLAST results are available for this feature:
BLAST of CK934565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
RCH1_ARATH3.947e-1743.59LRR receptor-like serine/threonine-protein kinase ... [more]
Y4265_ARATH6.732e-1744.83Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH8.793e-1739.71Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RCH2_ARATH1.148e-1643.10Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PSYR1_ARATH5.699e-1643.59Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y5148_ARATH9.721e-1637.82Probable leucine-rich repeat receptor-like protein... [more]
Y2317_ARATH1.658e-1538.52Probable leucine-rich repeat receptor-like protein... [more]
Y4291_ARATH2.166e-1540.00Probable LRR receptor-like serine/threonine-protei... [more]
IMK2_ARATH2.828e-1538.76Probably inactive leucine-rich repeat receptor-lik... [more]
WAKLQ_ARATH4.825e-1542.06Wall-associated receptor kinase-like 20 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004229_E07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934565 ID=CK934565; Name=CK934565; organism=Citrus sinensis; type=EST; length=643bp
GGGGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCCGAAT
ACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTATGGT
GTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAGCAGA
TTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGA
AAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAACATC
GAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGGATGA
TCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTTAAAG
AAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCACTGAT
GAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAGAAGC
TCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAAGCAT
TCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTGCCTT
TGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAAAATT
CTTGTTATTTATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top