CK934565

Overview
NameCK934565
Unique NameCK934565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5158 contig Csv1_Contig5158:249..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 2
Query:   32 GYVPPEY-YQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI-----SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 370
            GY+ PE   QS R S K DVYSYGVVLLEL+TG++P +S      N V  ++ + +  +     SD FD  L + + N   EL+Q + +   C  + P +RP+M +V+ + + I+ G G
Sbjct:  769 GYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESP---SENQVLILRDYVRDLLETGSASDCFDRRLREFEEN---ELIQVMKLGLLCTSENPLKRPSMAEVVQVLESIRNGFG 881          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 2
Query:   32 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLKI-SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 355
            GY  PE   + + S K DVYS+GV++LELLTGK PT      +  +L  WV    + +  SDVFDPEL +   +    +++ L++  +C    P  RPTM +V  + +E+
Sbjct:  504 GYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEV 613          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 2
Query:    8 VST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 352
            VST + GTPGY+ PEYY+++R + K DVYS+G+VLLE++T +   + A+   +          +  IS + DP L+ E  +  +   + L +A +C+D  P  RP M  V+   K+
Sbjct:  731 VSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVR--KALKLAMSCVDPSPVARPDMSHVVQELKQ 844          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 2
Query:   11 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD---NNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 343
            S +AGT GY+ PEY    + S K DV+S+GV+++E++TGKR  +    GD    +L+ WV +   +  I  V DP L     N   E+L+ +H+   C+ +    RPTM  V  M
Sbjct:  519 SRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRN---EILRCIHIGLLCVQESAATRPTMATVSLM 630          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 2
Query:   11 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 373
            + + GT G++ PEY  + + S K DV+ YG++LLEL+TG+R  D A   +++   L+ WVK   K  K+  + DP+L       E+E  Q + VA  C    P  RP M +V+ M +    G GL
Sbjct:  463 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELE--QVIQVALLCTQGSPMERPKMSEVVRMLE----GDGL 581          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = 2
Query:   11 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ--HAKLKISDVFDPELMKE--DPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 337
            +T+ GT GY+ PE   +   S + DVYSYGVVLLEL+T K+  D +  G+ ++VGWV+       +I  + DP L+ E  D ++  ++ + L +A  C +    +RPTM  V+
Sbjct:  977 NTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVV 1089          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 2
Query:   17 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGW----VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 349
            +AGT GY+ PEY QS R + K DVYS+GV++LE+L+GK PTD++      N+VGW    + ++   +I D+    + +E       L   L +A+ C+   P  RPTM +V+ + +
Sbjct:  463 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERE------SLDALLSIATKCVSSSPDERPTMHRVVQLLE 572          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   23 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGW-VKQHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVEMVEMSIQEA 451
            GTPGY+ P+Y+Q F+ S K DVYS+GVVL+E+++G +  D +  + + NL    V +  + ++ D+ DP L KE +P +   +     +A  CL      RPTM+++      I+            T+ G F     ++M  Q++
Sbjct:  478 GTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDLHRIKL-------MHYGTESGKFKNRSEIDMKRQQS 616          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 2
Query:    8 VSTLA-GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHV-ASACLDDRPWRRPTMIQVMAMFKEIQ 358
            V+T A GT GY+ PEYY +F+ + K DVYS+GVVL ELLT K+  D + +  D NLV +V++  K  ++ DV DP +       EIE ++ L V A  C+ +    RPTM QV A  KEI+
Sbjct:  516 VTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTM-QVAA--KEIE 633          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 2
Query:    8 VST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 361
            VST + GT GY  PEY  +   +TK DVYS+GVVLLELL+G+R  D +   G+ NLV W K +   K KI  V D  L  +D     E  +   ++  CL      RP M +V++  + IQ+
Sbjct:  236 VSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRL--QDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQS 355          
The following BLAST results are available for this feature:
BLAST of CK934565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
Y1124_ARATH4.993e-1237.82Probable LRR receptor-like serine/threonine-protei... [more]
Y5659_ARATH6.521e-1237.27Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y5169_ARATH6.521e-1235.34Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH6.521e-1236.52Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
SERK1_ARATH8.516e-1236.00Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RPK1_IPONI8.516e-1237.17Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
FEI2_ARATH8.516e-1237.07LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLR_ARATH1.112e-1130.82Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLP_ARATH1.112e-1144.63Wall-associated receptor kinase-like 15 OS=Arabido... [more]
APK1A_ARATH1.112e-1140.16Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004229_E07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934565 ID=CK934565; Name=CK934565; organism=Citrus sinensis; type=EST; length=643bp
GGGGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCCGAAT
ACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTATGGT
GTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAGCAGA
TTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGA
AAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAACATC
GAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGGATGA
TCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTTAAAG
AAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCACTGAT
GAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAGAAGC
TCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAAGCAT
TCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTGCCTT
TGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAAAATT
CTTGTTATTTATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top