CK934565

Overview
NameCK934565
Unique NameCK934565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   11 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD--NNLVGWVKQHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 337
            + +AGTPGY+ PEYY++   S K DVYS+GVVLLE++T +   D        N+ VG++    K  I  + DP+LM + D N   ++++   +A AC++    RRPTM  V+
Sbjct:  743 TVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHINDWVGFML--TKGDIKSIVDPKLMGDYDTNGAWKIVE---LALACVNPSSNRRPTMAHVV 849          
BLAST of CK934565 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 2
Query:   20 AGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 343
            AGTPGY+ PEY +    S K DVYSYGV++LE++ GKR T S      N V +V    K    L + D    E  K +     E+++ +H+A  C+ + P  RP    +M+M
Sbjct:  521 AGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNT-SFSSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSE-----EVIRCIHIALLCVQEEPTDRPDFSIIMSM 626          
The following BLAST results are available for this feature:
BLAST of CK934565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
Y1518_ARATH9.416e-1139.29Probable LRR receptor-like serine/threonine-protei... [more]
CRK13_ARATH9.416e-1137.50Cysteine-rich receptor-like protein kinase 13 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934565 ID=CK934565; Name=CK934565; organism=Citrus sinensis; type=EST; length=643bp
GGGGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCCGAAT
ACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTATGGT
GTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAGCAGA
TTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGA
AAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAACATC
GAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGGATGA
TCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTTAAAG
AAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCACTGAT
GAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAGAAGC
TCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAAGCAT
TCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTGCCTT
TGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAAAATT
CTTGTTATTTATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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