CK934566

Overview
NameCK934566
Unique NameCK934566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 2
Query:  278 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            + F+  EL+ AT NF    +LG+GG G VYKG +            G  VAVKK K       +E++ EV  L Q++H ++VKL+G CLE E   LVYEF+P G+
Sbjct:  437 RIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVD----------GRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGN 531          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13
Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 2
Query:  191 PIPPSKEKGNSESL--PTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            PI  +K   + +S   P    +  ++  SN++ ++  +L+ AT +F  D+LLGEG FG VY+   D           G V+AVKK+     P G     +++  V+ +  L HPN+ KL+GYC E    L+VYEF   GS
Sbjct:  371 PIDRNKSFDDEDSTRKPIAVKKSTVVVPSNVRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDD----------GKVLAVKKIDSSALPHGMTD--DFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGS 498          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 2
Query:  200 PSKEKGNSESLPTPKSEGEI--------------LSSSNLKAFTFNELKTATRNF--RPDSL----LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            P +EK  +  +P PK E                  S +   +F+F+ELK+ T NF  +P S     +GEGGFG VYKG ++   ++  K G+ + ++ ++LK +  Q       E+  +    H NLV+L+G+  + +N  LVY +MP GS
Sbjct:  126 PCQEKDRTSVMPMPKLEHSCEPPDSSSPDNRSVESSDTRFHSFSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCVNNTIVAVKKLGAMVEISTEELKQQFDQ-------EIKVMATCQHENLVELLGFSSDSDNLCLVYAYMPNGS 269          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  239 PKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            P  E   +    LK F+  EL+ A+  F   ++LG GGFG VYKG          +   G +VAVK+LK E   G + ++ TEV  +    H NL++L G+C+    RLLVY +M  GS
Sbjct:  275 PAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKG----------RLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 383          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13
Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  290 FNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            + +L  AT  F+   ++G GGFG V+KG      L  + P     +AVKK+ P   QG +E++ E+  LG+L H NLV L G+C    + LL+Y+++P GS
Sbjct:  357 YRDLYVATDGFKKTGIIGTGGFGTVFKG-----KLPNSDP-----IAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGS 447          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13
Identity = 42/125 (33.60%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  236 TPKSEGEILSSSNLKAFTFNELKTATRNF--RPDSL----LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            +P++     S +   +F+F ELK  T NF  RP S+    +GEGGFG VYKG+++  +++  K  + + ++ ++LK +  Q       E+  + +  H NLV+L+G+  +G++  LVY +MP GS
Sbjct:  153 SPENTSLEFSDTRFHSFSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNRTVAVKKLAAMVDISTEELKQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 270          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  278 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            K F+  EL+ AT NF  + ++G+GG G VYKG +            G  VAVKK         +E++ EV  L Q++H ++VKL+G CLE E  +LVYEF+P G+
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVD----------GRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGN 534          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  284 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 580
            F ++E+   T NF  + ++G+GGFG VY G I+           G  VAVK L  E  QG+KE+  EV+ L ++HH NL  L+GYC E  + +L+YE+M
Sbjct:  564 FKYSEVVNITNNF--ERVIGKGGFGKVYHGVIN-----------GEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYM 649          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13
Identity = 45/128 (35.16%), Postives = 67/128 (52.34%), Query Frame = 2
Query:  209 EKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            E  N + L    S+  +L  SN K  ++++L  +T +F   +++G GGFG VYK  +            G  VA+KKL  +  Q  +E+  EV  L +  HPNLV L G+C    +RLL+Y +M  GS
Sbjct:  697 ESMNRKELGEIGSKLVVLFQSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPD----------GKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGS 814          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  245 SEGEILSSS---NLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            S G++  SS     + FT++++   T NF+   ++G+GGFG VY+G ++               A+K L     QG+KE+ TEV  L ++HH  LV LIGYC +     L+YE M KG+
Sbjct:  534 SAGKVTRSSFKSENRRFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNNEQ-----------AAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGN 639          
The following BLAST results are available for this feature:
BLAST of CK934566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
WAKLK_ARATH2.927e-1341.90Putative wall-associated receptor kinase-like 11 O... [more]
SRF6_ARATH2.927e-1334.29Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
IRAK4_MOUSE2.927e-1331.79Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
SERK1_ARATH3.823e-1337.82Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
LRKA1_ARATH3.823e-1338.61Lectin-domain containing receptor kinase A4.1 OS=A... [more]
IRAK4_BOVIN3.823e-1333.60Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
WAKLL_ARATH4.993e-1340.95Putative wall-associated receptor kinase-like 13 O... [more]
SIRK_ARATH4.993e-1341.41Senescence-induced receptor-like serine/threonine-... [more]
PSKR1_ARATH4.993e-1335.16Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y1755_ARATH6.521e-1336.13Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934566 ID=CK934566; Name=CK934566; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTCTTTTTCTTTTTTGGTTTTTCAAAAAAGACAAGATA
TATTTTAAGTACGAAGAAATATGGGAAACTGTTTACAGCATTCTTCAGCT
AGAGTGGATTCCACCCAGAGCCCCCGCGCTACTTCTGGAGCCTCAAGAAT
TTCCACTAGATCTAGTCATTCTTCTGCCCCTTCCACCCTTCCCATTCCAC
CTTCAAAAGAAAAAGGCAATTCTGAAAGTCTTCCAACTCCAAAGTCTGAG
GGTGAAATATTGTCGTCCTCAAATTTGAAAGCCTTCACATTCAATGAGCT
CAAGACTGCCACCAGAAACTTCCGTCCCGACAGTCTTCTCGGCGAAGGTG
GATTTGGTTTTGTTTACAAAGGATGGATTGATCAACACTCACTTTCACCT
GCTAAGCCTGGATCAGGAATGGTCGTTGCTGTCAAGAAGCTTAAACCTGA
AGGTTTCCAAGGACACAAGGAGTGGTTGACAGAAGTTAATTATCTTGGCC
AGCTTCATCATCCAAATCTGGTTAAGCTAATTGGGTATTGCTTGGAGGGT
GAGAATCGGCTTCTGGTCTATGAGTTCATGCCCAAAGGGAGCC
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