CK934566

Overview
NameCK934566
Unique NameCK934566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 2
Query:  191 PIPPSKEKGN-----SESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK--EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            P PP  EK       S   P  K+  + L  +++K ++   L+  T +F  ++L+G G  G VY+          A+  +G + AVKKL     +  +  E++  VN +  + H N+V+L+GYC E + RLLVYE+   G+
Sbjct:  437 PPPPLDEKVTVMPIISPERPVKKTSPKRLPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYR----------ARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGT 567          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = 2
Query:  263 SSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ-GHKEWLTE-VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            S+ +   F  ++L++AT NF P +LLGEG  G VY+          AK   G  +AVKK+    F  G  E +T  V  L ++ H N+ +L+GYC E  + +LVYE+   GS
Sbjct:  385 STRSAVEFELSDLQSATANFSPGNLLGEGSIGRVYR----------AKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGS 486          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 2
Query:  266 SSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWI--DQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            +SN + +++ EL  ATR F+ +  LG G  G VYKG +  D+H            VAVKKL+    QG + +  E++ +G+++H NLV++ G+C EG +RLLV E++  GS
Sbjct:  518 TSNFRRYSYRELVKATRKFKVE--LGRGESGTVYKGVLEDDRH------------VAVKKLENVR-QGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGS 613          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 46/138 (33.33%), Postives = 63/138 (45.65%), Query Frame = 2
Query:  197 PPSKEKGNSESLPTPKSEGEILSSSNLKAFTFN--ELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP----EGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            PP      S + P P+S   +L  +    F +   E+   T NF  +  +GEGGFG VY+  +              V AVK+LK     E     + +LTEV  L +  HPN+V   GYC +     LVY F+P GS
Sbjct:  169 PPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSEELKIGEGGFGCVYRAVM-----------RNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGS 295          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 2
Query:  233 PTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            P    +  ++  SN+  +T ++L+ AT +F  D+LLGEG FG VY+   +           G V+AVKK+           ++   V+ +  L H N+ KL GYC E    L+VYEF   GS
Sbjct:  390 PIVAKKAAVVVPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFE----------DGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGS 501          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 46/141 (32.62%), Postives = 65/141 (46.10%), Query Frame = 2
Query:  197 PPSKEKGNSESLPTPKSEGEILSSSNLKAFTF--NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-------EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            PP      S + P+P+S   +L  +   +F +  +E+   T +F  +  +GEGGFG VY+  +              V AVK+LK E      EW T       EV  L +  HPN+V   GYC +     LVY F+P GS
Sbjct:  169 PPLPSPAPSSTKPSPESPMSLLPGAPSSSFCWPLHEICQGTHDFSEELKIGEGGFGCVYRAVM-----------RNTVYAVKRLKEEA---DLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGS 295          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2
Query:  278 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            + F+  E+K+ATRNF+   ++G G FG VY+G          K   G  VAVK        G   ++ EV+ L Q+ H NLV   G+C E + ++LVYE++  GS
Sbjct:  594 RIFSHKEIKSATRNFK--EVIGRGSFGAVYRG----------KLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGS 686          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  245 SEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE--WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            S   I S      +T + L+ AT +F  ++++GEG  G VY+          A+  +G ++A+KK+        +E  +L  V+ + +L HPN+V L GYC E   RLLVYE++  G+
Sbjct:  370 SISRIRSPITASQYTVSSLQVATNSFSQENIIGEGSLGRVYR----------AEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGN 477          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 2
Query:  260 LSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 580
            ++   LK F + EL+ AT NF   ++LG+GGFG VYKG +  ++           VAVK+L   E   G   +  EV  +    H NL++LIG+C     RLLVY FM
Sbjct:  270 IAFGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNT----------KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFM 367          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11
Identity = 35/102 (34.31%), Postives = 56/102 (54.90%), Query Frame = 2
Query:  287 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            + +++  +T +F   +++G GGFG VYK  +            G  VA+K+L  +  Q  +E+  EV  L +  HPNLV L+GYC    ++LL+Y +M  GS
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPD----------GTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGS 823          
The following BLAST results are available for this feature:
BLAST of CK934566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
SRF3_ARATH1.606e-1131.21Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
SRF5_ARATH2.098e-1137.50Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
KPRO_MAIZE2.098e-1138.74Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
IRAK1_HUMAN2.098e-1133.33Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
SRF7_ARATH4.674e-1133.61Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
IRAK1_BOVIN4.674e-1132.62Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
Y5487_ARATH6.104e-1137.14Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH6.104e-1133.05Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y5129_ARATH7.972e-1138.89Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA7.972e-1134.31Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934566 ID=CK934566; Name=CK934566; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTCTTTTTCTTTTTTGGTTTTTCAAAAAAGACAAGATA
TATTTTAAGTACGAAGAAATATGGGAAACTGTTTACAGCATTCTTCAGCT
AGAGTGGATTCCACCCAGAGCCCCCGCGCTACTTCTGGAGCCTCAAGAAT
TTCCACTAGATCTAGTCATTCTTCTGCCCCTTCCACCCTTCCCATTCCAC
CTTCAAAAGAAAAAGGCAATTCTGAAAGTCTTCCAACTCCAAAGTCTGAG
GGTGAAATATTGTCGTCCTCAAATTTGAAAGCCTTCACATTCAATGAGCT
CAAGACTGCCACCAGAAACTTCCGTCCCGACAGTCTTCTCGGCGAAGGTG
GATTTGGTTTTGTTTACAAAGGATGGATTGATCAACACTCACTTTCACCT
GCTAAGCCTGGATCAGGAATGGTCGTTGCTGTCAAGAAGCTTAAACCTGA
AGGTTTCCAAGGACACAAGGAGTGGTTGACAGAAGTTAATTATCTTGGCC
AGCTTCATCATCCAAATCTGGTTAAGCTAATTGGGTATTGCTTGGAGGGT
GAGAATCGGCTTCTGGTCTATGAGTTCATGCCCAAAGGGAGCC
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