CK934566

Overview
NameCK934566
Unique NameCK934566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.100e-15
Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  284 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            F + +L  AT  F+ + ++G GGFG VY+G I   S           +AVKK+ P   QG +E++ E+  LG+L H NLV L G+C    + LL+Y+++P GS
Sbjct:  351 FRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQ---------IAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGS 444          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 2
Query:  284 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 589
            F F EL+TAT+NF  +++ G GGFG VY G ID           G  VA+K+      QG  E+ TE+  L +L H +LV LIG+C E +  +LVYE+M  G
Sbjct:  513 FPFTELQTATQNFDENAVCGVGGFGKVYIGEID----------GGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNG 604          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 2
Query:  278 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 589
            + FT++E+   T NF    ++GEGGFG V  G ++         GS  V AVK L     QG+KE+  EV+ L ++HH NLV L+GYC EG++  L+YEF+P G
Sbjct:  568 RKFTYSEVTKMTNNF--GRVVGEGGFGVVCHGTVN---------GSEQV-AVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNG 659          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  284 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEV-----NYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            FT+ ++  AT NF  + ++G GG+G VY+G +            G  VAVKKL+ EG +  KE+  E+     N  G   HPNLV+L G+CL+G  ++LV+E+M  GS
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPD----------GREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGS 899          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 2
Query:  242 KSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 589
            + EG +  S   + F+ +EL+ AT NF  + +LG+GG G VYKG +            G +VAVK+ K       +E++ EV  L Q++H N+VKL+G CLE E  +LVYEF+P G
Sbjct:  393 RKEGNVEMS---RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVD----------GRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNG 495          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  278 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 589
            K F+  EL+ AT NF  D +LG+GG G VYKG +            G +VAVK+ K       +E++ E+  L Q++H N+VKL+G CLE E  +LVYE++P G
Sbjct:  415 KIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVD----------GSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNG 508          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = 2
Query:  206 KEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            + K        P  E   +    LK FT  EL  AT NF   ++LG GGFG VYKG          +   G +VAVK+LK E  +G + ++ TEV  +    H NL++L G+C+    RLLVY +M  GS
Sbjct:  256 RRKPQDHFFDVPAEEDPEVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKG----------RLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 375          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 49/128 (38.28%), Postives = 65/128 (50.78%), Query Frame = 2
Query:  218 NSESLPTPKSEGEILSSSNLKA---FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            N  S+ +  S G  L+S    A     F  +K AT NF     +G GGFG VYKG ++           G  VAVK+  P+  QG  E+ TE+  L Q  H +LV LIGYC E    +L+YE+M  G+
Sbjct:  448 NGTSMGSKYSNGTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELND----------GTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGT 565          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  206 KEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 589
            K + +S   P+P  +      +  K +T+ E+   T+ F  + +LG+GGFG VY G+I+              VAVK L P   QG+KE+ TEV  L +++H NLV L+GYC E ++  L+Y++M  G
Sbjct:  537 KRRSSSRKGPSPSQQS---IETIKKRYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYINGTE----------EVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNG 649          
BLAST of CK934566 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  284 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 592
            F    +  AT  F  ++ LG+GGFG VYKG +           +G  VAVK+L     QG  E+  EV+ L +L H NLVKL+G+C EG+ ++LVYEF+P  S
Sbjct:  341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLL----------NGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSS 433          
The following BLAST results are available for this feature:
BLAST of CK934566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
LRKA3_ARATH9.100e-1538.83Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y5613_ARATH1.188e-1443.14Probable receptor-like protein kinase At5g61350 OS... [more]
Y5596_ARATH1.188e-1443.27Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH1.188e-1439.81Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH1.188e-1440.52Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLA_ARATH1.188e-1442.31Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
SERK4_ARATH1.188e-1437.69Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
HERK_ARATH1.188e-1438.28Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y1756_ARATH1.552e-1435.94Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH1.552e-1442.72Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934566 ID=CK934566; Name=CK934566; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTCTTTTTCTTTTTTGGTTTTTCAAAAAAGACAAGATA
TATTTTAAGTACGAAGAAATATGGGAAACTGTTTACAGCATTCTTCAGCT
AGAGTGGATTCCACCCAGAGCCCCCGCGCTACTTCTGGAGCCTCAAGAAT
TTCCACTAGATCTAGTCATTCTTCTGCCCCTTCCACCCTTCCCATTCCAC
CTTCAAAAGAAAAAGGCAATTCTGAAAGTCTTCCAACTCCAAAGTCTGAG
GGTGAAATATTGTCGTCCTCAAATTTGAAAGCCTTCACATTCAATGAGCT
CAAGACTGCCACCAGAAACTTCCGTCCCGACAGTCTTCTCGGCGAAGGTG
GATTTGGTTTTGTTTACAAAGGATGGATTGATCAACACTCACTTTCACCT
GCTAAGCCTGGATCAGGAATGGTCGTTGCTGTCAAGAAGCTTAAACCTGA
AGGTTTCCAAGGACACAAGGAGTGGTTGACAGAAGTTAATTATCTTGGCC
AGCTTCATCATCCAAATCTGGTTAAGCTAATTGGGTATTGCTTGGAGGGT
GAGAATCGGCTTCTGGTCTATGAGTTCATGCCCAAAGGGAGCC
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