CK934571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934571 vs. ExPASy Swiss-Prot
Match: H2BWT_HUMAN (Histone H2B type W-T OS=Homo sapiens GN=H2BFWT PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 41/86 (47.67%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 267 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARDNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 524 +++ Y +VLKQVH + +S +A+ +M+S ++DI +++A EA RLAR K+ TIT+ E + AVRL+LPG++ K A SEGTKAV + Sbjct: 79 DSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAGRLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
BLAST of CK934571 vs. ExPASy Swiss-Prot
Match: H2BFM_HUMAN (Histone H2B type F-M OS=Homo sapiens GN=H2BFM PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.364e-15 Identity = 39/86 (45.35%), Postives = 62/86 (72.09%), Query Frame = 3 Query: 267 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARDNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 524 +++ Y +VLKQVH + +S +A+ +M+S I+DI +++A EA +LA K+ TITSR+IQ AVRL+LPG++ K A ++GT A + Sbjct: 161 DSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246
BLAST of CK934571 vs. ExPASy Swiss-Prot
Match: H2BV_BOVIN (Histone H2B subacrosomal variant OS=Bos taurus GN=SUBH2BV PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14 Identity = 40/91 (43.96%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 264 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARDNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 536 + Y +YI +VLK+V P GISS+ + I+N+ IND+FE+++ EA L K+ T+T +I+ AV L+LP +LAK+AV+ G +AV ++ S Sbjct: 32 LRNYSLYINRVLKEVVPQKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLLLPEKLAKYAVAFGKEAVQRYVRS 122
BLAST of CK934571 vs. ExPASy Swiss-Prot
Match: H2BV_MOUSE (Histone H2B subacrosomal variant OS=Mus musculus GN=Subh2bv PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 273 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARDNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 536 Y +YI +VLK+V P+ GISS ++ IMN INDIFE++A EA + K+ T+T +IQ AV L+LP +LA AV+ G+KAV +F S Sbjct: 36 YSLYINRVLKEVVPNRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLLLPKKLATLAVTFGSKAVHRFIHS 123
BLAST of CK934571 vs. ExPASy Swiss-Prot
Match: H2BV1_DICDI (Histone H2B.v1 OS=Dictyostelium discoideum GN=H2Bv1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 279 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARDNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 536 IYI K++KQ++P I K++ I+ S I D + EA L + + K T+++R++QT+VRL GE+++HAVSEG K VT F S+ Sbjct: 18 IYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNSA 103 The following BLAST results are available for this feature:
BLAST of CK934571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934571 ID=CK934571; Name=CK934571; organism=Citrus sinensis; type=EST; length=704bpback to top |