CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC5 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_XANAC (Chaperone protein dnaJ OS=Xanthomonas axonopodis pv. citri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLTR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFE 497
            ++D Y++LGV RN +  EIK AY+K+ALKYHPD+N  +  A + FKE+T +Y +LSD +KR  YD  G E
Sbjct:    3 KKDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEITAAYEVLSDSEKRAGYDRYGHE 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RHISN (Chaperone protein dnaJ OS=Rhizobium sp. (strain NGR234) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++RD YE LGV +N  ++E+KSA+RK+A+KYHPD+N  D  A   FKE+  +Y  L DP KR  YD  G  A
Sbjct:    1 MKRDLYETLGVKKNADEKELKSAFRKLAMKYHPDRNPGDQEAEKSFKEINEAYETLKDPQKRAAYDRYGHAA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEJ (Chaperone protein dnaJ OS=Ralstonia eutropha (strain JMP134) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK AYRK+A+KYHPD+N +   + + FKEV  +Y +LSD +K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKESEEKFKEVKEAYEMLSDAEKKAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEF5 (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV R  +D E+K AYR++A+K+HPD+N  D  + D+FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVERGSSDAELKKAYRRLAMKHHPDRNPGDKASEDMFKEANEAYEVLSDSSKRAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            + D YE LGV RN +D +IK A+R++A+KYHPD+N ++P A + FK V  +Y++LSDP KR  YD  G   +
Sbjct:    3 KEDYYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFGHAGI 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCV (Chaperone protein dnaJ OS=Chlamydophila caviae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            D Y+VLGVS+  + +EIK +YRK+A+KYHPDKN  D  A   FKEV+ +Y +LSDP KR  YD  G
Sbjct:    2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYG 67          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            D Y+VLGVS+  + +EIK +YRK+A+KYHPDKN  D  A   FKEV+ +Y +LSDP KR  YD  G
Sbjct:    2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYG 67          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N ++  A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_XANC51.106e-1452.11Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANAC1.106e-1452.11Chaperone protein dnaJ OS=Xanthomonas axonopodis p... [more]
DNAJ_WOLTR1.106e-1451.43Chaperone protein dnaJ OS=Wolbachia sp. subsp. Bru... [more]
DNAJ_RHISN1.106e-1450.00Chaperone protein dnaJ OS=Rhizobium sp. (strain NG... [more]
DNAJ_RALEJ1.106e-1451.39Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_PSEF51.106e-1450.00Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_METCA1.106e-1448.61Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]
DNAJ_CHLCV1.106e-1456.06Chaperone protein dnaJ OS=Chlamydophila caviae GN=... [more]
DNAJ_CHLAB1.106e-1456.06Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_BURVG1.106e-1452.78Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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