CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRSD (Chaperone protein dnaJ OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLG+ R    +EIK AYR++A KYHPD+N +D  AA+ F+EV+ +Y +L+D +KR  YD  G   V
Sbjct:    3 KRDYYEVLGIERGADQKEIKKAYRRLAQKYHPDRNPDDDTAAEKFREVSEAYEVLTDEEKRSAYDQFGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURPS (Chaperone protein dnaJ OS=Burkholderia pseudomallei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP6 (Chaperone protein dnaJ OS=Burkholderia pseudomallei (strain 668) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP1 (Chaperone protein dnaJ OS=Burkholderia pseudomallei (strain 1710b) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP0 (Chaperone protein dnaJ OS=Burkholderia pseudomallei (strain 1106a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURMS (Chaperone protein dnaJ OS=Burkholderia mallei (strain SAVP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURMA (Chaperone protein dnaJ OS=Burkholderia mallei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM9 (Chaperone protein dnaJ OS=Burkholderia mallei (strain NCTC 10229) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM7 (Chaperone protein dnaJ OS=Burkholderia mallei (strain NCTC 10247) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCM (Chaperone protein dnaJ OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3 
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CHRSD1.444e-1450.00Chaperone protein dnaJ OS=Chromohalobacter salexig... [more]
DNAJ_BURPS1.444e-1452.78Chaperone protein dnaJ OS=Burkholderia pseudomalle... [more]
DNAJ_BURP61.444e-1452.78Chaperone protein dnaJ OS=Burkholderia pseudomalle... [more]
DNAJ_BURP11.444e-1452.78Chaperone protein dnaJ OS=Burkholderia pseudomalle... [more]
DNAJ_BURP01.444e-1452.78Chaperone protein dnaJ OS=Burkholderia pseudomalle... [more]
DNAJ_BURMS1.444e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei (str... [more]
DNAJ_BURMA1.444e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei GN=d... [more]
DNAJ_BURM91.444e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei (str... [more]
DNAJ_BURM71.444e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei (str... [more]
DNAJ_BURCM1.444e-1452.78Chaperone protein dnaJ OS=Burkholderia ambifaria (... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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