CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1706 contig Csv1_Contig1706:1..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPH (Chaperone protein dnaJ OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKL 587
            +RD YEVLG+S++ +D EIK AYRK+A +YHPD N  D  A   FKE + +Y +LSDP+K+RQ+D  G  A               G +  +F  +F  +
Sbjct:    4 KRDYYEVLGISKSASDDEIKKAYRKLAKQYHPDANPGDQTAEAKFKEASEAYAVLSDPEKKRQFDQFGHAAFEQGGGGAGGFDFNMGDMGDIFGDIFGDI 103          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOK5 (Chaperone protein dnaJ OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16
Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            ++D YE+LG+ +  +DQ+IK A+RK+ALKYHPD+N ND  A + FKE+  +Y +L+DP K+ QYD  G
Sbjct:    3 KKDYYEILGLDKGASDQDIKKAFRKLALKYHPDRNPNDKKAEEKFKEINEAYQVLTDPQKKAQYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVY (Chaperone protein dnaJ OS=Vibrio vulnificus (strain YJ016) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AAD FKEV  +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVU (Chaperone protein dnaJ OS=Vibrio vulnificus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AAD FKEV  +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAA 73          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CLOPH7.656e-1641.00Chaperone protein dnaJ OS=Clostridium phytoferment... [more]
DNAJ_CLOK57.656e-1651.47Chaperone protein dnaJ OS=Clostridium kluyveri (st... [more]
DNAJ_ACIBY1.000e-1554.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT1.000e-1554.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS1.000e-1554.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC1.000e-1554.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB51.000e-1554.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB31.000e-1554.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_VIBVY1.306e-1553.52Chaperone protein dnaJ OS=Vibrio vulnificus (strai... [more]
DNAJ_VIBVU1.306e-1553.52Chaperone protein dnaJ OS=Vibrio vulnificus GN=dna... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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