CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_AGGAC (Chaperone protein dnaJ OS=Aggregatibacter actinomycetemcomitans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LG+SR+  ++EIK AY+K+A++YHPD+   D    + FKE+  +Y +L+D +KR  YD  G  A
Sbjct:    3 KQDYYELLGISRSADEKEIKRAYKKLAMQYHPDRTKGDKEKEEKFKEIQEAYEVLNDKEKRAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCTU (Chaperone protein dnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            + RD Y +LGVS+N +D +IK AYRK+A + HPD N ++   A  FKE++ +Y +LSDPDKRR  D  G
Sbjct:    1 MARDYYGLLGVSKNASDADIKRAYRKLARELHPDVNPDEAAQAK-FKEISVAYEVLSDPDKRRIVDLGG 68          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCBO (Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            + RD Y +LGVS+N +D +IK AYRK+A + HPD N ++   A  FKE++ +Y +LSDPDKRR  D  G
Sbjct:    1 MARDYYGLLGVSKNASDADIKRAYRKLARELHPDVNPDEAAQAK-FKEISVAYEVLSDPDKRRIVDLGG 68          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFE 497
            +RD YEVLGVS++ +  EIK AYRK++ KYHPD N  +  A + FKE++ +Y +LSD +KR  YD  G +
Sbjct:    3 KRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEG-AEEKFKEISEAYEVLSDENKRANYDQFGHD 71          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOS7 (Chaperone protein dnaJ OS=Rhodopseudomonas sp. (strain No.7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +R  YE L V RN  D  +KSA+RK+A+K+HPD+N  DP     FKE+  +Y +L D DKR  YD  G  A
Sbjct:    5 KRCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAA 75          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPT (Chaperone protein dnaJ OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +R  YE L V RN  D  +KSA+RK+A+K+HPD+N  DP     FKE+  +Y +L D DKR  YD  G  A
Sbjct:    5 KRCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAA 75          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPA (Chaperone protein dnaJ OS=Rhodopseudomonas palustris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +R  YE L V RN  D  +KSA+RK+A+K+HPD+N  DP     FKE+  +Y +L D DKR  YD  G  A
Sbjct:    5 KRCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAA 75          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOPR (Chaperone protein dnaJ OS=Photobacterium profundum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV R+  +++IK AY+++A+K+HPD+N  +  A + FKEV  +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVGRDAGERDIKKAYKRLAMKFHPDRN-QEADATEKFKEVKTAYEILTDPQKKAAYDQYGHAA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PARL1 (Chaperone protein dnaJ OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD Y+VLGVSRN +  E+K AYR +A KYHPD+N  D  A   FKE+  +Y+ L D   R  YD  G  A
Sbjct:    3 KRDFYDVLGVSRNASADELKKAYRSLAKKYHPDQNQGDKEAEQRFKELNEAYDALKDEQSRAAYDQFGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGE (Chaperone protein dnaJ OS=Mycoplasma genitalium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAA-----DIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLG+S+N + Q+IK A+RK+A++YHPD++  +         + FKEV  +Y +LSD +KR+ YD  G E +
Sbjct:    5 KRDYYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSDEEKRKLYDQFGHEGL 81          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_AGGAC3.011e-1243.66Chaperone protein dnaJ OS=Aggregatibacter actinomy... [more]
DNAJ2_MYCTU3.011e-1250.72Chaperone protein dnaJ 2 OS=Mycobacterium tubercul... [more]
DNAJ2_MYCBO3.011e-1250.72Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN... [more]
DNAJ_STACT3.932e-1250.00Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_RHOS73.932e-1247.89Chaperone protein dnaJ OS=Rhodopseudomonas sp. (st... [more]
DNAJ_RHOPT3.932e-1247.89Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_RHOPA3.932e-1247.89Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_PHOPR3.932e-1247.89Chaperone protein dnaJ OS=Photobacterium profundum... [more]
DNAJ_PARL13.932e-1249.30Chaperone protein dnaJ OS=Parvibaculum lavamentivo... [more]
DNAJ_MYCGE3.932e-1244.16Chaperone protein dnaJ OS=Mycoplasma genitalium GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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