CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALF 578
            +RD YEVLG+S+  + +EIK AY+K++ KYHPD N  +  A D FKE+  +Y +LSD  K+ QYD  G   +              G    +F++ F
Sbjct:    3 KRDYYEVLGLSKGASKEEIKRAYKKLSKKYHPDIN-KEADAEDKFKEIAEAYEVLSDDQKKAQYDQFGHAGMGQGAGFGGQDFGGFGGFEDIFSSFF 98          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LYSSC (Chaperone protein dnaJ OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFE 497
            +RD YEVLG++++ T  EIK AYRK++ +YHPD N  +P A + FKE+  +Y +LSD  K+ +YD  G E
Sbjct:    3 KRDYYEVLGLTKSATKDEIKKAYRKLSKQYHPDLN-KEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHE 71          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +RD YEVLGVS++ +  EIK AYRK++ +YHPD N  +  A + FKE++ +Y  LSDP KR QYD  G
Sbjct:    3 KRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDIN-KEAGADEKFKEISEAYEALSDPQKRAQYDQYG 69          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +RD YEVLGVS++ +  EIK AYRK++ +YHPD N  +  A + FKE++ +Y  LSDP KR QYD  G
Sbjct:    3 KRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDIN-KEAGADEKFKEISEAYEALSDPQKRAQYDQYG 69          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPCP (Chaperone protein dnaJ OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAA--DIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +  ++ EIK AYRK+A+K+HPD+N  D   A  + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVGKTASEDEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEMLSDAQKRAAYDQFGHAGV 76          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_FINM2 (Chaperone protein dnaJ OS=Finegoldia magna (strain ATCC 29328) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  300 YEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            YE+L V+ N T +EIK +YR++A KYHPD N+ D  A + FKE+  +Y +L D +KR++YD  G
Sbjct:    5 YEILEVNENATQEEIKKSYRRLAKKYHPDINSGDSEAENKFKEINGAYEVLGDKEKRKKYDMYG 68          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTS8 (Chaperone protein dnaJ OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGV +   ++EIK AY+++A+K+HPD+N  D  A   FKE+  +Y IL+D  KR  YD  G  A
Sbjct:    3 KKDYYEILGVPKTADEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 590
            + RD Y++LGVSR+   +++K AYR++A KYHPD N  +  A + FKE+  +Y +LSDP+ R +YD  G EA               G    +F ++FS  G
Sbjct:    1 MARDYYDILGVSRDAGQEDLKQAYRRLARKYHPDVN-KEAGAEERFKEINRAYEVLSDPETRARYDRFG-EAGVSGAAAGYGDMGDMGGFADIFESIFSGFG 100          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAPZ (Chaperone protein dnaJ OS=Anaplasma phagocytophilum (strain HZ) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            D Y++LGVSR  +++EIK +YRK   +YHPD+N  +  A + FK+++ +Y++L+D DKR  YD  G  A
Sbjct:    5 DYYDLLGVSRGASEEEIKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLTDSDKRAAYDRYGHSA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACEP3 (Chaperone protein dnaJ OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 47/133 (35.34%), Postives = 64/133 (48.12%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV----XXXXXXXXXXXXXXGAVNTMFAALF-----------SKLGVPIKTTVSATVLEEALNGM 647
            D Y +L VSR  T  E+K +YRK+A+KYHPD+N  D  A   FKE+  +Y+IL D  KR  YD  G  A                   G +  +F  +F           ++ G  I+T V  T LEEA +G+
Sbjct:    6 DYYAILEVSRTATADELKKSYRKLAMKYHPDRNPGDDAAEAKFKEINQAYDILKDEQKRAAYDQYGHAAFEGGGPGPGGFDFGGGFGGGGLGDIFEQMFGDMMGGRRGGRARTGNDIQTHVEIT-LEEAFSGV 137          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_MACCJ3.932e-1238.14Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]
DNAJ_LYSSC3.932e-1248.57Chaperone protein dnaJ OS=Lysinibacillus sphaericu... [more]
DNAJ_LISMF3.932e-1252.94Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC3.932e-1252.94Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LEPCP3.932e-1248.65Chaperone protein dnaJ OS=Leptothrix cholodnii (st... [more]
DNAJ_FINM23.932e-1248.44Chaperone protein dnaJ OS=Finegoldia magna (strain... [more]
DNAJ_ENTS83.932e-1245.07Chaperone protein dnaJ OS=Enterobacter sakazakii (... [more]
DNAJ_CYAP43.932e-1238.24Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_ANAPZ3.932e-1244.93Chaperone protein dnaJ OS=Anaplasma phagocytophilu... [more]
DNAJ_ACEP33.932e-1235.34Chaperone protein dnaJ OS=Acetobacter pasteurianus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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