CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PELUB (Chaperone protein dnaJ OS=Pelagibacter ubique GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.228e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD Y+VLGVS++ + +E+KSAYRK+A+KYHPDKN  D  + D FKE   +Y +LSD +K++ YD  G  A
Sbjct:    3 KRDFYDVLGVSKSASPEELKSAYRKLAVKYHPDKNPGDKASEDKFKEAGEAYGVLSDKEKKQNYDNFGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_JANMA (Chaperone protein dnaJ OS=Janthinobacterium sp. (strain Marseille) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.228e-15
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 590
            +RD YE+LGV ++ +D+EIK AYRK+A+K+HPD+N +   A D FKE   +Y +LSDP KR  YD  G   V               A   +F  +F + G
Sbjct:    3 KRDFYEILGVGKSASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYGHAGVDPNMGGGGGGGGFADAFGDIFGDIFGQAG 103          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPD (Chaperone protein dnaJ OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.228e-15
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +++D YEVLG+SR+ T  EIK AYRK+A++YHPDKN ++  A + FKEV  +Y  LS+ DKRR+YD  G   V
Sbjct:    1 MKKDYYEVLGLSRSATKDEIKKAYRKLAMQYHPDKNPDNKDAEEHFKEVNEAYEALSNDDKRRRYDQFGHAGV 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ALHEH (Chaperone protein dnaJ OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.228e-15
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            + D YE LGV+RN +D EIK AYR+MA+KYHPD+N  D  A   FKE   +Y ILSDP KR  YD  G   V
Sbjct:    3 KSDYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQKRAAYDQFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCP (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R  +D+E+K AYR+ A+KYHPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCB (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R  +D+E+K AYR+ A+KYHPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC8 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R  +D+E+K AYR+ A+KYHPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_NITOC (Chaperone protein dnaJ OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YE LGV+RN +D EIK AYR++A++YHPD+N +D  A + FKE+  +Y++LSD  KR  YD  G   V
Sbjct:    3 KRDYYEALGVARNASDAEIKKAYRRLAMRYHPDRNPDDKAAEEHFKEIQEAYDVLSDARKRTAYDQFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_HALHL (Chaperone protein dnaJ OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYR+MA K+HPD+N  D  +A+ FKEV  +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVNKNASDAEIKKAYRRMAQKFHPDRNPGDEESAERFKEVKEAYEVLSDAQKRAAYDQFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLG+S+    QEIK AYRK+A+KYHPD+N  D  A + FKE+  +Y +LSD  KR+ YD  G + +
Sbjct:    4 KRDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGL 75          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PELUB2.228e-1552.11Chaperone protein dnaJ OS=Pelagibacter ubique GN=d... [more]
DNAJ_JANMA2.228e-1540.59Chaperone protein dnaJ OS=Janthinobacterium sp. (s... [more]
DNAJ_CHLPD2.228e-1553.42Chaperone protein dnaJ OS=Chlorobium phaeobacteroi... [more]
DNAJ_ALHEH2.228e-1555.56Chaperone protein dnaJ OS=Alkalilimnicola ehrliche... [more]
DNAJ_XANCP2.909e-1553.52Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANCB2.909e-1553.52Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANC82.909e-1553.52Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_NITOC2.909e-1551.39Chaperone protein dnaJ OS=Nitrosococcus oceani (st... [more]
DNAJ_HALHL2.909e-1554.17Chaperone protein dnaJ OS=Halorhodospira halophila... [more]
DNAJ_CLOD62.909e-1551.39Chaperone protein dnaJ OS=Clostridium difficile (s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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