CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPIC (Chaperone protein dnaJ OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            R  Y++LGVS++  D+EIKSAYRK+A+KYHPDKN  +  + + FKE T +Y IL DP KR+ YD  G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBL (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            R  Y++LGVS++  D+EIKSAYRK+A+KYHPDKN  +  + + FKE T +Y IL DP KR+ YD  G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBJ (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            R  Y++LGVS++  D+EIKSAYRK+A+KYHPDKN  +  + + FKE T +Y IL DP KR+ YD  G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRVO (Chaperone protein dnaJ OS=Chromobacterium violaceum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD Y+VLGV+R+ +D +IK AYRK+A+KYHPD+N +   A D FKEV  +Y ILSD  KR  YD  G   V
Sbjct:    3 KRDYYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDSKEAEDKFKEVKEAYEILSDSQKRGAYDQFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BARQU (Chaperone protein dnaJ OS=Bartonella quintana GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++ D YE+LGV+R C D+++KSA+RK+A++YHPD+NA D  A   FKE+  +Y +L DP KR  YD  G  A
Sbjct:    1 MKVDYYEILGVTRECDDKKLKSAFRKLAMQYHPDRNAGDKEAERRFKEIGEAYEVLKDPQKRAAYDRFGHAA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++ D YE+LGV+R C D+++KSA+RK+A++YHPD+NA D  A   FKE+  +Y +L DP KR  YD  G  A
Sbjct:    1 MKVDYYEILGVTRECDDKKLKSAFRKLAMQYHPDRNAGDKEAERKFKEIGEAYEVLKDPQKRAAYDRFGHAA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGV RN T++EIK AYR++A +YHPD N  +  A + FKE+  +Y +LSDP+KR+ YD  G  A
Sbjct:    4 KKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAA 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJH_SYNY3 (DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803) GN=slr0093 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +D Y++LGV++  ++ EIK  +RK+ALKYHPDKN  D  A + FKE++ +Y +LSDP+KR++YD  G
Sbjct:    7 KDYYQILGVTKTASEAEIKKQFRKLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKRQKYDQFG 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBSL (Chaperone protein dnaJ OS=Vibrio splendidus (strain LGP32) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AAD FKEV  +Y IL+D  K+  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDDSAADKFKEVKVAYEILTDAQKKAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YE+L VSR+ T Q+IK A+RK+A+KYHPD+N  D  A + FKEV  +Y +LSD +KR+ YDT G E +
Sbjct:    4 KRDYYEILEVSRSATQQDIKKAFRKLAMKYHPDRN-KDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGL 74          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LEPIC4.963e-1555.22Chaperone protein dnaJ OS=Leptospira interrogans s... [more]
DNAJ_LEPBL4.963e-1555.22Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_LEPBJ4.963e-1555.22Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_CHRVO4.963e-1554.17Chaperone protein dnaJ OS=Chromobacterium violaceu... [more]
DNAJ_BARQU4.963e-1550.00Chaperone protein dnaJ OS=Bartonella quintana GN=d... [more]
DNAJ_BARHE4.963e-1550.00Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]
DNAJ_ANATD4.963e-1550.70Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJH_SYNY34.963e-1550.75DnAJ-like protein slr0093 OS=Synechocystis sp. (st... [more]
DNAJ_VIBSL6.482e-1552.11Chaperone protein dnaJ OS=Vibrio splendidus (strai... [more]
DNAJ_MYCGA6.482e-1554.17Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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