CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVV (Chaperone protein dnaJ OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV+R+ ++ +IK AYRK+AL+YHPD+N +DP A   FKE   +Y++L D +KR +YD  G   V
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDPEAEQKFKEAAEAYDVLRDGEKRARYDRFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVM (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +RD YEVLGV+R+ ++ EIK  YRK+AL+YHPD+N ++P A  +FKE   +Y++L D DKR +YD  G
Sbjct:    3 QRDYYEVLGVARDASEDEIKRQYRKLALQYHPDRNPDNPEAEQMFKEAAEAYDVLRDADKRARYDRFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVH (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV+R+ ++ +IK AYRK+AL+YHPD+N +DP A   FKE   +Y++L D +KR +YD  G   V
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDPEAEQKFKEAAEAYDVLRDGEKRARYDRFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CUPTR (Chaperone protein dnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK AYRK+A+K+HPD+N +   A + FKE   +Y +LSDP+K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKFHPDRNPDSKDAEEKFKEAKEAYEMLSDPEKKAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIF5 (Chaperone protein dnaJ OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV-XXXXXXXXXXXXXXGAVNTMFAALF------------SKLGVPIKTTVSATVLEEALNGMVTVR 659
            RD YEVL +SR   D EIK +YR++A++YHPD+N +D  A + FKE++ +Y +LSDP KR+ YD  G   V               G    +F+ LF            S  G  ++  +  T+ E AL   VT++
Sbjct:    4 RDYYEVLEISRTADDGEIKKSYRRLAMRYHPDRNPDDASAEERFKEISAAYEVLSDPQKRQAYDRFGHAGVNGGGGGPGAGFGGGGGGFGDVFSDLFEQAFGGGFRGQDSGRGADLRYELELTLEEAALGKEVTIQ 139          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIF2 (Chaperone protein dnaJ OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV-XXXXXXXXXXXXXXGAVNTMFAALF------------SKLGVPIKTTVSATVLEEALNGMVTVR 659
            RD YEVL +SR   D EIK +YR++A++YHPD+N +D  A + FKE++ +Y +LSDP KR+ YD  G   V               G    +F+ LF            S  G  ++  +  T+ E AL   VT++
Sbjct:    4 RDYYEVLEISRTADDGEIKKSYRRLAMRYHPDRNPDDASAEERFKEISAAYEVLSDPQKRQAYDRFGHAGVNGGGGGPGAGFGGGGGGFGDVFSDLFEQAFGGGFRGQDSGRGADLRYELELTLEEAALGKEVTIQ 139          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_THET2 (Chaperone protein dnaJ OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +D Y +LGVSR  + +EIK AYR++ALKYHPD+N  D  A + FKE+  +Y +LSDP KR  YD    EA
Sbjct:    2 KDYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKRAAYDRGHLEA 71          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_STRM5 (Chaperone protein dnaJ OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R   D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD+ G  A
Sbjct:    3 KRDYYEVLGVARTANDEELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEH (Chaperone protein dnaJ OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKN---ANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK AYRK+A+KYHPD+N    +  +A + FKEV  +Y +LSDP+K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGV 77          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEST (Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV R  ++ E+K AYR++A+K+HPD+N  D  A + FKE   +Y +LSDP KR  YD  G   V
Sbjct:    3 KRDFYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDPSKRAAYDQYGHAGV 74          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_DESVV6.482e-1551.39Chaperone protein dnaJ OS=Desulfovibrio vulgaris s... [more]
DNAJ_DESVM6.482e-1552.94Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_DESVH6.482e-1551.39Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_CUPTR6.482e-1551.39Chaperone protein dnaJ OS=Cupriavidus taiwanensis ... [more]
DNAJ_ACIF56.482e-1535.29Chaperone protein dnaJ OS=Acidithiobacillus ferroo... [more]
DNAJ_ACIF26.482e-1535.29Chaperone protein dnaJ OS=Acidithiobacillus ferroo... [more]
DNAJ_THET28.465e-1552.86Chaperone protein dnaJ OS=Thermus thermophilus (st... [more]
DNAJ_STRM58.465e-1552.11Chaperone protein dnaJ OS=Stenotrophomonas maltoph... [more]
DNAJ_RALEH8.465e-1552.00Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_PSEST8.465e-1550.00Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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