CK934575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_GLUOX (UDP-N-acetylmuramate--L-alanine ligase OS=Gluconobacter oxydans GN=murC PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.109e-12 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A VL+ D T I G + + + G G V+EADE DG FL L +AVVTN+D EH+D + E+A+++ + +F+ I G V+C D Sbjct: 119 KTTTTSLVACVLEHARLDPTVINGGIIEAYGTNTRM-GSGDWMVVEADESDGSFLRLPAVIAVVTNMDPEHLDHWGTEEAMQAGYDQFVSNIPFYGFAVLCVD 220 HSP 2 Score: 26.5646 bits (57), Expect = 4.109e-12 Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 728 DYKIITYGFSSFNDWYAESVCPNVQGGS 811 D+++ITYGFS D AE V + +G + Sbjct: 233 DHRVITYGFSPQADIRAEKVVMDKRGAT 260
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_SACEN (UDP-N-acetylmuramate--L-alanine ligase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=murC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K++T SML L+ D + +G + + + +G G FV EADE DG FL +PSVAVVTN++ +H+D +A +F+RF+++I GG L+ C D Sbjct: 137 KTSTTSMLTVALQHCRLDPSFAIGGDLNE-SGANAHHGDGGVFVAEADESDGSFLVFAPSVAVVTNVEPDHLDHHGTAEAYTEVFQRFVERIEPGGVLIACAD 238
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_RHOPS (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain BisB5) GN=murC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM+A +L A D T I G + + + G G V+EADE DG FL L VAVVTN+D EH+D F+ DAV+ FR F++ + G V+C D Sbjct: 118 KTTTTSMVAALLDAGDVDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAVVTNVDPEHLDHFKTFDAVQDAFRIFVENVPFYGFAVMCID 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_CHLPD (UDP-N-acetylmuramate--L-alanine ligase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=murC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT +M+A +L G+ T ++G V + GS G GK V+EADE+D FL L+P++AV+ +L+ EH+D + + ++ F F ++ G ++ C D Sbjct: 118 KTTTTAMIATMLIEAGESPTVMIGG-VSDYLKGSTVVGSGKYLVIEADEFDRAFLKLTPTIAVINSLESEHMDTYGTIEELRKAFIAFANKVPFYGRVICCVD 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_ARTS2 (UDP-N-acetylmuramate--L-alanine ligase OS=Arthrobacter sp. (strain FB24) GN=murC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 KSTT SM+ +L+ G D T +GA+VP + G FV EADE DG FL P +AVVTN++ +H+D + +AV F F + + G LV C D Sbjct: 127 KSTTTSMVTVLLQGAGLDPTFAIGANVPSLGVNAAS-GTSDIFVAEADESDGSFLNYRPHIAVVTNVEPDHLDYYGTAEAVYESFDSFTELLPADGVLVACAD 228
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_AGRVS (UDP-N-acetylmuramate--L-alanine ligase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=murC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM+A +L+A D T I G + + + G G+ V+EADE DG FL L VAVVTN+D EH+D + + DAV++ FR+F++ + G V+C D Sbjct: 118 KTTTTSMVAALLEAGQLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVVTNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLD 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_GRABC (UDP-N-acetylmuramate--L-alanine ligase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=murC PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.333e-12 Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A VL+A D T I G + + + G G+ V+EADE DG FL L +AVVTN+D EH+D + +A+++ +++F+ I G V+C D Sbjct: 119 KTTTTSLIAAVLEAAQLDPTVINGGIINAYGTNTRL-GAGEWMVVEADESDGSFLRLPAVIAVVTNMDPEHLDHWGTAEAMEAGYQQFVSNIPFYGFAVLCID 220 HSP 2 Score: 24.6386 bits (52), Expect = 5.333e-12 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2 Query: 728 DYKIITYGFSSFNDWYAESV 787 D++IITYGFS D AE + Sbjct: 233 DHRIITYGFSPQADVRAERI 252
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_GLUDA (UDP-N-acetylmuramate--L-alanine ligase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=murC PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 5.334e-12 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A VL+A D T I G + + + G G V+EADE DG FL L + VVTN+D EH+D + +A+++ + +F+ I G V+C D Sbjct: 119 KTTTTSLIAAVLEAARLDPTVINGGIIEAYGTNTRM-GSGDWMVVEADESDGSFLRLPSVITVVTNMDPEHLDHWGTAEAMQAAYDQFVSNIPFYGFAVLCID 220 HSP 2 Score: 26.5646 bits (57), Expect = 5.334e-12 Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = 2 Query: 728 DYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGR 838 D++I+TYGFS D AE V + G + + ++ R R Sbjct: 233 DHRIVTYGFSPQADIRAEKVITDKLGATFEVVVTNRNR 270
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_ZYMMO (UDP-N-acetylmuramate--L-alanine ligase OS=Zymomonas mobilis GN=murC PE=3 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 5.335e-12 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM+A +L A G D T I G + + + G V+EADE DG FL L ++A+VTN+D EH+D + + V+ F F+ + G +C D Sbjct: 119 KTTTTSMVAALLDAGGIDPTVINGGIINSYGSNARL-GDSDWMVVEADESDGSFLRLDGTLAIVTNIDPEHLDHYGSFEKVQDAFVEFVSNVPFYGAAFLCID 220 HSP 2 Score: 28.8758 bits (63), Expect = 5.335e-12 Identity = 15/37 (40.54%), Postives = 22/37 (59.46%), Query Frame = 2 Query: 728 DYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 838 D ++ITYGFS+ D A + P + GG+ + RGR Sbjct: 233 DRRLITYGFSAQADIRAVDITP-ISGGNRFTAVIRGR 268
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_DESVV (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=murC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P V VVTN+D +HVD + + + F F+ ++ G V+CGD Sbjct: 116 KTTTTSLTAAIFDVAGKDPTVIIGGRLNAY-GANARLGEGEYLIAEADESDGSFLCLFPIVNVVTNVDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGD 217 The following BLAST results are available for this feature:
BLAST of CK934575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934575 ID=CK934575; Name=CK934575; organism=Citrus sinensis; type=EST; length=847bpback to top |