CK934575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_DESVH (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=murC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P V VVTN+D +HVD + + + F F+ ++ G V+CGD Sbjct: 116 KTTTTSLTAAIFDVAGKDPTVIIGGRLNAY-GANARLGEGEYLIAEADESDGSFLCLFPIVNVVTNVDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGD 217
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_DESMR (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=murC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S+LA + G D T I+G + + G+ G G+ + EADE DG FL LSP +VVTN+D +H+D ++ +A+ F FL I G V+C D Sbjct: 116 KTTTTSLLATIFTEAGYDPTVIIGGRLNAYGAGARL-GQGEYLIAEADESDGSFLCLSPIASVVTNVDADHLDHYDGIEAIDDAFVDFLNNIPFYGVNVVCLD 217
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_DESDA (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=murC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P + VVTN+D +H+D ++ +A+ S F +F+ + G ++CGD Sbjct: 116 KTTTTSLTASIFDEAGLDPTVIIGGRLNVY-GANAHLGHGEYLIAEADESDGSFLCLLPIINVVTNVDEDHLDHYKTREAINSAFVQFMNNVPFYGLNIVCGD 217
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_ARTAT (UDP-N-acetylmuramate--L-alanine ligase OS=Arthrobacter aurescens (strain TC1) GN=murC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 KSTT SM+A +LK G D + +GA+VP + +G FV EADE DG FL P +AVVTN++ +H+D + +AV + F F + G L+ C D Sbjct: 122 KSTTTSMVAVLLKEAGLDPSFAIGANVPALGVNAA-HGSSDIFVAEADESDGSFLNYRPLIAVVTNVEADHLDHYGTPEAVFASFDDFAALLPAQGVLLACSD 223
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_RHOP5 (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain BisA53) GN=murC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F+ +AV++ FR F++ + G V+C D Sbjct: 118 KTTTTSMVAALLDAGEFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFEAVQNAFRDFVENVPFYGFAVMCID 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_PARL1 (UDP-N-acetylmuramate--L-alanine ligase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=murC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A +L G D T I G + + + GGG+ V+EADE DG F+ L ++A+VTN+D EH+D + DA K F F++ + G V+C D Sbjct: 119 KTTTTSLVAAILDKAGLDPTVINGGIINAYGTNARL-GGGEWMVVEADESDGTFVKLPATIAIVTNIDPEHLDYYGSFDAAKDAFLAFVENVPFYGAAVMCID 220
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_METSB (UDP-N-acetylmuramate--L-alanine ligase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=murC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A +L+A G D T I G + + S G G V+EADE DG FL L VA++TN+D EH+D F + ++ FR F++ I G V+C D Sbjct: 118 KTTTTSLVATLLEAGGFDPTVINGGIINAYGTNSRL-GAGDWMVVEADESDGTFLKLPADVAIITNIDPEHLDHFGTFENIRKAFRSFVENIPFYGFAVMCLD 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_BORGA (UDP-N-acetylmuramate--L-alanine ligase OS=Borrelia garinii GN=murC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12 Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT + L + +G + IVG+ V F D S G F++E EY FL SP++ ++TN+D+EHVD F++ +A++ F +++ ++ G L+I D Sbjct: 125 KTTTTAFLGILFDKLGLNPNVIVGSSVKDFGDNSAIAGISDIFIVETCEYKKHFLYFSPNMLILTNVDYEHVDFFKNYEALEDAFLQYINNLKKNGILIINSD 227
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_ACICJ (UDP-N-acetylmuramate--L-alanine ligase OS=Acidiphilium cryptum (strain JF-5) GN=murC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A VL+ G D T I G + + + GGG V+EADE DG FL L +AVVTN+D EH+D + +A+++ +R+F+ I G V+C D Sbjct: 119 KTTTTSLVAAVLEGAGLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGSFLRLPAVIAVVTNMDPEHLDHWGSAEAMEAGYRQFVSNIPFYGFAVLCID 220
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_PARUW (UDP-N-acetylmuramate--L-alanine ligase OS=Protochlamydia amoebophila (strain UWE25) GN=murC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11 Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 268 ICTRQARSQT-----RKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFED-EDAVKSIFRRFLKQIRVGGHLVICGD 609 + TRQ +S K+TT+S+LA L D + VG +PQF + +G G FV EADE D FL P A+VTN+D +H++ +E+ ED + F++F QI HL CGD Sbjct: 97 LLTRQKKSLAVTGTHGKTTTSSLLATTLLEANCDSSFAVGGIIPQFQSNAK-HGLGDLFVFEADESDRSFLKYFPYGAIVTNIDNDHLNSYENSEDVLIQSFQQFTSQISSPNHLFWCGD 215 The following BLAST results are available for this feature:
BLAST of CK934575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934575 ID=CK934575; Name=CK934575; organism=Citrus sinensis; type=EST; length=847bpback to top |