CK934575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_MYCSK (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium sp. (strain KMS) GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SML L+ G D + VG + + + +G G+ FV EADE DG L +P VAVVTN++ +H+D F +A ++F F++++ GG L+ C D Sbjct: 126 KTTTTSMLIVALQHCGFDPSFAVGGDLGEAGTNA-HHGSGECFVAEADESDGSLLEYTPDVAVVTNIEADHLDFFGSAEAYTAVFDAFVERLTPGGALIACVD 227
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_MYCSJ (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium sp. (strain JLS) GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SML L+ G D + VG + + + +G G+ FV EADE DG L +P VAVVTN++ +H+D F +A ++F F++++ GG L+ C D Sbjct: 126 KTTTTSMLIVALQHCGFDPSFAVGGDLGEAGTNA-HHGSGECFVAEADESDGSLLEYTPDVAVVTNIEADHLDFFGSAEAYTAVFDAFVERLTPGGALIACVD 227
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_MYCMM (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM+ L+ G D + VG + + + +G G FV EADE DG L +P VAVVTN++ +H+D + +A +F F++++ GG LV+C D Sbjct: 126 KTTTTSMVIVALQHCGRDPSFAVGGELGEAGTNA-HHGSGDYFVAEADESDGSLLEYTPHVAVVTNIEADHLDFYGSTEAYVGVFDAFVERLAPGGALVVCAD 227
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_METS4 (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium sp. (strain 4-46) GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A +L A G D T I G + + + G G+ V+EADE DG FL L +A+VTN+D EH+D F DA+K FR F+ I G V+C D Sbjct: 118 KTTTTSLVATLLDAGGLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADIAIVTNIDPEHLDHFGSFDAIKDAFRAFIDNIPFYGFAVMCID 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_CALS8 (UDP-N-acetylmuramate--L-alanine ligase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLV 597 K+TT SM+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +PS+ V+ N+D +H+D F+D +++K FR+F +I G +V Sbjct: 113 KTTTTSMIGYILKKALLNPTVLVGAFVKQL-GGNFCIGSSEYLVVEACEYVDSFLNFNPSIGVILNIDNDHLDYFKDIESIKDSFRKFALKIPQNGFIV 210
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_AQUAE (UDP-N-acetylmuramate--L-alanine ligase OS=Aquifex aeolicus GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI 600 K+TT SM+A +L G + T I+G + + + G G+ V EADE DG FL L P+VAV+TN+D EH+D +E+ + VK F +F+ + G V+ Sbjct: 117 KTTTTSMIAEILINAGLEPTVIIGGRLKRLGTNAKL-GRGELLVSEADESDGSFLKLQPAVAVITNVDKEHLDFYENFERVKEAFEQFMNSVPFYGFAVV 215
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_RHIL3 (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=murC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A +L+A G D T I G + + + G G+ V+EADE DG FL L VAV+TN+D EH+D + + DAV++ FR+F++ + G V+C D Sbjct: 118 KTTTTSLVATLLEAGGLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLD 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_RHIEC (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=murC PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A +L+A G D T I G + + + G G+ V+EADE DG FL L VAV+TN+D EH+D + + DAV++ FR+F++ + G V+C D Sbjct: 118 KTTTTSLVATLLEAGGLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLD 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_NITWN (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=murC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D Sbjct: 118 KTTTTSMVATLLDAGDFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPTDVAIVTNVDAEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCID 219
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_FLAPJ (UDP-N-acetylmuramate--L-alanine ligase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=murC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQI 576 K+TT+S+L ++L G D+TA +G V + I G GK V+EADE+D FL L P++A VT++D +H+DI+ D+ A+K+ F+ F ++ Sbjct: 122 KTTTSSILGHILYESGADVTAFIGGIVENYNSNLI--GSGKTVTVVEADEFDRSFLHLYPNIACVTSMDADHLDIYGDDAAIKASFKEFADKV 212 The following BLAST results are available for this feature:
BLAST of CK934575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934575 ID=CK934575; Name=CK934575; organism=Citrus sinensis; type=EST; length=847bpback to top |