CK934580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_OENPA (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Oenothera parviflora GN=ndhC PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.167e-58 Identity = 106/120 (88.33%), Postives = 115/120 (95.83%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLLY+YDIFWAFLIISSVIPILAF IS +LAP +KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVET+FLYPWA+SFD+LGV VFIEA IF+LIL++GLVYAWRKGALEWS Sbjct: 1 MFLLYEYDIFWAFLIISSVIPILAFRISGLLAPTSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETIFLYPWALSFDILGVSVFIEALIFVLILVLGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_OENAR (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Oenothera argillicola GN=ndhC PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.167e-58 Identity = 106/120 (88.33%), Postives = 115/120 (95.83%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLLY+YDIFWAFLIISSVIPILAF IS +LAP +KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVET+FLYPWA+SFD+LGV VFIEA IF+LIL++GLVYAWRKGALEWS Sbjct: 1 MFLLYEYDIFWAFLIISSVIPILAFRISGLLAPTSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETIFLYPWALSFDILGVSVFIEALIFVLILVLGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_CERDE (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Ceratophyllum demersum GN=ndhC PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.167e-58 Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLL++YDIFWAFLIISS+IPILAFLIS VLAP+++GPEK SSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV VFIEA IF+LI IVGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLIISSIIPILAFLISGVLAPLSEGPEKFSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLIPIVGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_CALFG (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Calycanthus floridus var. glaucus GN=ndhC PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.167e-58 Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLL++YDIFWAFLIISSVIPILAFLIS VLAPI +GPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV VFIEA IF+LI IVG VYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLIISSVIPILAFLISGVLAPIREGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLIPIVGSVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_PELHO (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Pelargonium hortorum GN=ndhC PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 9.361e-58 Identity = 107/120 (89.17%), Postives = 115/120 (95.83%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLLY+YD+FW FLIISS+IPILAFLIS VLAPI++GPEKLSSYESGIEPMGDAWLQFRIRYY+FALVFVVFDVETVFLYPWAMSFDVLGV VFIEA +F+LILIVG VYAWRKGALEWS Sbjct: 1 MFLLYEYDLFWVFLIISSLIPILAFLISGVLAPISEGPEKLSSYESGIEPMGDAWLQFRIRYYIFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALVFVLILIVGSVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_ORYSJ (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhC PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 106/120 (88.33%), Postives = 116/120 (96.67%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLL++YDIFWAFLII+S+IPILAF ISA+LAP+ +GPEKLSSYESGIEPMG AWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG+ VFIEAFIF+LIL+VGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLIIASLIPILAFWISALLAPVREGPEKLSSYESGIEPMGGAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEAFIFVLILVVGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_ORYSI (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Oryza sativa subsp. indica GN=ndhC PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 106/120 (88.33%), Postives = 116/120 (96.67%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLL++YDIFWAFLII+S+IPILAF ISA+LAP+ +GPEKLSSYESGIEPMG AWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG+ VFIEAFIF+LIL+VGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLIIASLIPILAFWISALLAPVREGPEKLSSYESGIEPMGGAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEAFIFVLILVVGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_ORYSA (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Oryza sativa GN=ndhC PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 106/120 (88.33%), Postives = 116/120 (96.67%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLL++YDIFWAFLII+S+IPILAF ISA+LAP+ +GPEKLSSYESGIEPMG AWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG+ VFIEAFIF+LIL+VGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLIIASLIPILAFWISALLAPVREGPEKLSSYESGIEPMGGAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEAFIFVLILVVGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_ORYNI (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Oryza nivara GN=ndhC PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 106/120 (88.33%), Postives = 116/120 (96.67%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLL++YDIFWAFLII+S+IPILAF ISA+LAP+ +GPEKLSSYESGIEPMG AWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG+ VFIEAFIF+LIL+VGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLIIASLIPILAFWISALLAPVREGPEKLSSYESGIEPMGGAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEAFIFVLILVVGLVYAWRKGALEWS 120
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3C_CICAR (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cicer arietinum GN=ndhC PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 2 Query: 206 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 MFLLY+YDIFW FLIIS +IPILAFLIS +LAPI KGPEKLSSYESGIEPMGDAWLQF+IRYYMFALVFVVFDVETVFLYPWAMSFDVLGV VFIEA IF+LILIVG VYAWRKGALEWS Sbjct: 1 MFLLYEYDIFWTFLIISILIPILAFLISGILAPIRKGPEKLSSYESGIEPMGDAWLQFQIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGSVYAWRKGALEWS 120 The following BLAST results are available for this feature:
BLAST of CK934580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934580 ID=CK934580; Name=CK934580; organism=Citrus sinensis; type=EST; length=618bpback to top |