CK934604

Overview
NameCK934604
Unique NameCK934604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN1_ORYSJ (Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.206e-28
Identity = 55/106 (51.89%), Postives = 77/106 (72.64%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y +AL K++++F AQRSG LP +  ++WR NS L DGK+       DLVGG+YDAGD +KF FP +FT+TM++WSV+EY  +  AAGEL H  + ++WG DYF+K
Sbjct:   41 DYRMALSKSILYFEAQRSGVLPGNQRIAWRANSGLADGKANGV----DLVGGYYDAGDNVKFGFPMAFTVTMMAWSVLEYGKQMAAAGELGHAMDAVRWGADYFVK 142          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.882e-28
Identity = 66/139 (47.48%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  446 LLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHH 862
            L + A+L       V      HH  A P +Y  AL K+++FF  QRSGKLP    VSWRG+S L DG    SSI  DLVGG+YDAGD +KF FP +F++TML+WSV+E+    +  GEL H ++ ++WG+DY LK   H
Sbjct:    7 LFLLAVLLPHRNAAVVAAASPHHGPA-PHDYRDALTKSILFFEGQRSGKLPPSQRVSWRGDSGLSDG----SSIKVDLVGGYYDAGDNMKFGFPLAFSMTMLAWSVVEFGGLMK--GELQHARDAVRWGSDYLLKATAH 138          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.763e-28
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y +AL K++++F AQRSG LP +  VSWR +S L DGK+       DLVGG+YDAGD +KF  P +FT+TM+SWS++EY  +  AAGEL +  + +KWGTDYF+K
Sbjct:   34 DYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGV----DLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIK 135          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.915e-28
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 2
Query:  524 RPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHH 862
            +P +Y  AL K+L++F AQRSG+LP    V+WRG+S L DG         DLVGG+YDAGD +KF  P +FT+TMLSW  I+++A   AAGE  H  E IKWGTDYF+K   H
Sbjct:   52 QPLDYREALEKSLLYFEAQRSGRLPYSQRVTWRGHSGLTDGLQQGV----DLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHTH 160          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.915e-28
Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL K+++FF AQRSG LP +  VSWR +S L DGKS+      DLVGG+YDAGD +KF  P +FT+T + WS+IEY  + E+ GEL H  + +KWGTDYF+K
Sbjct:   26 DYKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGV----DLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIK 127          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN6_ARATH (Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL K+L+FF AQRSG LP++  V+WR +S L DGKS+  +    LVGG+YDAGD +KF  P +FT+TM++WSVIEY  + +A GEL +  + IKWGTDYF+K
Sbjct:   25 DYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLTDGKSSGVN----LVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWGTDYFIK 126          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.186e-27
Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 2
Query:  506 HHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHH 862
            HH  H    NY  AL K+++FF  QRSGKLP +  ++WR NS L DG    S+++ DLVGG+YDAGD +KF FP +FT TMLSWS+IE+    ++  EL + K+ I+W TD+ LK   H
Sbjct:   34 HHRHHLDNHNYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDG----SALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMKS--ELPNAKDAIRWATDFLLKATSH 146          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN16_ARATH (Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43860 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.161e-27
Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K+L+F  AQRSGKLP +N V WRG+S L DGK     ++ DL GG+YDAGD +K+  P +FTIT L+WS I Y  +  A GEL + +  I+WGTDYFLK
Sbjct:   34 NYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKL----VNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYFLK 135          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.434e-27
Identity = 58/106 (54.72%), Postives = 74/106 (69.81%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL K+L++F AQRSG+LP +  V+WR +S L DG         DLVGG++DAGD +KF  P +FT+TMLSWSVIEY     + GEL+H  E IKWGTDYF+K
Sbjct:   39 DYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGV----DLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIK 140          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27
Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 2
Query:  506 HHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            HH  H    NY  AL K+++FF  QRSGKLP +  +SWR +S L DG    S++  DLVGG+YDAGD IKF FP +FT TMLSWSVIE+    ++  EL + K  I+W TDY LK
Sbjct:   43 HHRHHLAKHNYKDALTKSILFFEGQRSGKLPSNQRMSWRRDSGLSDG----SALHVDLVGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGGLMKS--ELQNAKIAIRWATDYLLK 151          
The following BLAST results are available for this feature:
BLAST of CK934604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN1_ORYSJ2.206e-2851.89Endoglucanase 1 OS=Oryza sativa subsp. japonica GN... [more]
GUN3_ORYSJ2.882e-2847.48Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUN15_ORYSJ3.763e-2852.83Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]
GUN22_ORYSJ4.915e-2853.10Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN19_ARATH4.915e-2853.77Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11... [more]
GUN6_ARATH1.868e-2754.72Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g643... [more]
GUN1_ARATH3.186e-2749.58Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN16_ARATH4.161e-2754.72Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43... [more]
GUN11_ARATH5.434e-2754.72Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32... [more]
GUN17_ARATH7.098e-2753.04Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_A05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934604 ID=CK934604; Name=CK934604; organism=Citrus sinensis; type=EST; length=876bp
GGGATGGAAAAATTCAGCAAGTAATTTGACAGNNNGATCAGAGCACCACC
GTCACCACCAAATCACACCACACAACTCTACAAAACCAGACCGGAGCATT
CACAGTACAAACTTTCCATCTTAATTCTTGAGAGAGAAAGAGATCTAACA
TATCTTTAGCTGAGGGGAGAGTGAGTGAGTGTGAGATTTGATTTGGTAAC
AAACAATGAGTATGTTTGGAAGAGATCCGTGGGGTGGCCCACTGGAGATC
AACGCGGCGGACTCAGCCACTGACGACGATCGGAGCAGGAACCTTCAGGA
TTTCGACAGGGCAGCTCTGTCTCGGCCCTTGGATGAGACCCAGCAGAGCT
GGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAGTACGTAGATCTGGGT
TGCATCATCGTCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACTCTTCT
CGTCTCCGCACTCTTAGCCGGCTTCATCACTCTTATTGTCAAAACGGTGC
CGCGTCATCACCACTCTCATGCTCGCCCTGATAATTACACTCTCGCTTTG
CACAAGGCCCTCATGTTCTTCAATGCCCAACGATCTGGCAAATTACCCAA
GCATAATAACGTTTCTTGGAGGGGAAATTCTTGTCTGAAGGATGGCAAAT
CGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGGGGTTTTTACGATGCT
GGGGATGCCATTAAGTTTAATTTTCCTCAATCTTTTACTATTACCATGCT
CAGCTGGAGTGTGATTGAGTACAGTGCTAAGTACGAAGCTGCTGGTGAGC
TTAACCATGTTAAGGAAATTATCAAGTGGGGTACTGATTACTTTCTCAAG
ACCCTTCATCACTCTGCTGATTCCAT
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