CK934604

Overview
NameCK934604
Unique NameCK934604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.581e-26
Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = 2
Query:  455 SALLAGFITLIVKTVPRHHHSHARPD-NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +AL AG + + + T      +HA P  NY  AL K++ F+ AQRSGKLP++N VSWRG+S L DG    + +  DL GG+YDAGD +KF FP +FT TML+W  IE    Y  +G++ ++K+ ++W  DYF+K
Sbjct:   28 AALTAGMLGVPLATGT----AHAEPAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDG----ADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIK 152          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.697e-26
Identity = 60/113 (53.10%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHHSAD 871
            +Y  ALH  L++F AQRSG LP +  V WRG+S L DG         DLVGG+YDAGD +KF  P +FT+TMLSW+  E+  +  AAGE  HV E IKWGTDY +K  H +AD
Sbjct:   36 DYKKALHSGLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGV----DLVGGYYDAGDNVKFGLPMAFTMTMLSWAAAEFWDEIAAAGERRHVLEAIKWGTDYLVKA-HTAAD 143          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN8_ORYSJ (Endoglucanase 8 OS=Oryza sativa subsp. japonica GN=Os02g0778600 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 2
Query:  455 SALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +ALL   + L    +P      A   NY  AL K++MF  AQRSGKLP  N + WRG+S ++DGK A+     DL GG+YDAGD +K+  P +FT+T L+W+ + +  + +AA EL +V   I+WGTDYFLK
Sbjct:   16 AALLLAALVLSGDVLPAVVAGGAPSFNYKDALTKSIMFLEAQRSGKLPPTNRIKWRGDSGMEDGKLANV----DLTGGYYDAGDNVKYGLPLAFTVTTLAWTAMAFEKELKAARELENVHAAIRWGTDYFLK 143          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNF_CLOTH (Endoglucanase F OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celF PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.025e-25
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  452 VSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            + A L     + V  +P+   S A   NY  AL KA+MF+  QRSGKLP++   +WRG+S L DG    +    DL GG+YDAGD +KFN P ++ +TML+WSV E    Y  +G+L ++ + IKW TDYF+K
Sbjct:    4 ILAFLLTVALVAVVAIPQAVVSFAADFNYGEALQKAIMFYEFQRSGKLPENKRNNWRGDSALNDG----ADNGLDLTGGWYDAGDHVKFNLPMAYAVTMLAWSVYESRDAYVQSGQLPYILDNIKWATDYFIK 132          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN23_ARATH (Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39000 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.339e-25
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 2
Query:  521 ARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTL 856
            A P +Y+ AL K+++FF  QRSG+LPK   ++WR NS L DGK+    +  DLVGG+YDAGD +KF+FP +FT TML+WS +++  +Y +  +  H    +KW TDY LKT+
Sbjct:   21 AIPHDYSDALRKSILFFEGQRSGRLPKQQRMAWRRNSALNDGKN----LKTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSVDF-GRYMSQHDFRHNLVAVKWATDYLLKTV 127          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNA_BACPU (Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.895e-25
Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY   L K+++F+ AQRSG+LP+ N ++WRG+S LKDGK     +  DL GG+YDAGD +KF  P +++  +L+W+V EY   YE A  L+ + + IKW TDYFLK
Sbjct:   48 NYVEVLQKSMLFYEAQRSGRLPESNRLNWRGDSGLKDGKD----VGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDEILDQIKWATDYFLK 149          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.676e-25
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL KA++FF  QRSG+LP +   +WRG+S L DG+  + +    L GG+YDAGD +KF +P +FT+T+L WS +EY A   AAGEL +++  I+WG D+ L+
Sbjct:   40 DYGDALAKAILFFEGQRSGRLPANQRATWRGDSALTDGREENVN----LTGGYYDAGDNVKFGYPMAFTVTLLGWSAVEYGAAVAAAGELGNLRAAIRWGADFLLR 141          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN4_BACS5 (Endoglucanase 4 OS=Bacillus sp. (strain KSM-522) PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.133e-24
Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY   L K+++F+ AQRSGKLP+ N ++WRG+S L+DGK     +  DL GG+YDAGD +KF  P +++  +L+W+V EY   YE A  L+ + + IKW TDYFLK
Sbjct:   29 NYVEVLQKSILFYEAQRSGKLPESNRLNWRGDSGLEDGKD----VGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDDMLDQIKWATDYFLK 130          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.480e-24
Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  512 HSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +++A P NY  AL K+L+FF  QRSG+LP    +SWR +S L DG SA      DL GG+YDAGD +KFNFP +FT TMLSWS +EY  K     EL + +  I+W TDY LK
Sbjct:   18 NTYASP-NYREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHV----DLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKK--MGPELQNSRVAIRWATDYLLK 123          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.480e-24
Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 2
Query:  437 VGTLLVSALLAGFITLIVKTVPRHHHSHARPD-----NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFL 847
            +G +++ A++   I  I     RH  +H+  D     NY  AL  A+ FF+ Q+SGKL ++N +SWRG+S LKDG  AS  +SK    G YDAGD +KF FP +FT T+LSWS++EY  +  +   L+H K+ +KW TD+ +
Sbjct:   16 IGVIILIAIIIAVIFTI-----RHRSNHSDDDGSNVKNYANALKIAMQFFDIQKSGKL-ENNEISWRGDSGLKDGSEASIDLSK----GLYDAGDHMKFGFPMAFTATVLSWSILEYGDQMASLNLLDHAKDSLKWTTDFLI 147          
The following BLAST results are available for this feature:
BLAST of CK934604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN4_THEFU1.581e-2645.86Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUN21_ORYSJ2.697e-2653.10Endoglucanase 21 OS=Oryza sativa subsp. japonica G... [more]
GUN8_ORYSJ7.847e-2645.45Endoglucanase 8 OS=Oryza sativa subsp. japonica GN... [more]
GUNF_CLOTH1.025e-2544.36Endoglucanase F OS=Clostridium thermocellum (strai... [more]
GUN23_ARATH1.339e-2548.21Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39... [more]
GUNA_BACPU3.895e-2549.06Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 S... [more]
GUN20_ORYSJ8.676e-2547.17Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]
GUN4_BACS51.133e-2449.06Endoglucanase 4 OS=Bacillus sp. (strain KSM-522) P... [more]
GUN3_ARATH1.480e-2452.21Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUN2_ARATH1.480e-2442.25Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_A05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934604 ID=CK934604; Name=CK934604; organism=Citrus sinensis; type=EST; length=876bp
GGGATGGAAAAATTCAGCAAGTAATTTGACAGNNNGATCAGAGCACCACC
GTCACCACCAAATCACACCACACAACTCTACAAAACCAGACCGGAGCATT
CACAGTACAAACTTTCCATCTTAATTCTTGAGAGAGAAAGAGATCTAACA
TATCTTTAGCTGAGGGGAGAGTGAGTGAGTGTGAGATTTGATTTGGTAAC
AAACAATGAGTATGTTTGGAAGAGATCCGTGGGGTGGCCCACTGGAGATC
AACGCGGCGGACTCAGCCACTGACGACGATCGGAGCAGGAACCTTCAGGA
TTTCGACAGGGCAGCTCTGTCTCGGCCCTTGGATGAGACCCAGCAGAGCT
GGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAGTACGTAGATCTGGGT
TGCATCATCGTCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACTCTTCT
CGTCTCCGCACTCTTAGCCGGCTTCATCACTCTTATTGTCAAAACGGTGC
CGCGTCATCACCACTCTCATGCTCGCCCTGATAATTACACTCTCGCTTTG
CACAAGGCCCTCATGTTCTTCAATGCCCAACGATCTGGCAAATTACCCAA
GCATAATAACGTTTCTTGGAGGGGAAATTCTTGTCTGAAGGATGGCAAAT
CGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGGGGTTTTTACGATGCT
GGGGATGCCATTAAGTTTAATTTTCCTCAATCTTTTACTATTACCATGCT
CAGCTGGAGTGTGATTGAGTACAGTGCTAAGTACGAAGCTGCTGGTGAGC
TTAACCATGTTAAGGAAATTATCAAGTGGGGTACTGATTACTTTCTCAAG
ACCCTTCATCACTCTGCTGATTCCAT
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