CK934604

Overview
NameCK934604
Unique NameCK934604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.933e-24
Identity = 55/106 (51.89%), Postives = 70/106 (66.04%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K+L++F AQRSGKLP +  V+WRG+S LKDG  A      DL GG+YDAGD +KF FP +FT TML+WS IE  ++  A  E  +    +KW TDY +K
Sbjct:   33 NYAEALQKSLLYFEAQRSGKLPPNQKVTWRGDSALKDGSDAHI----DLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMGSELRAHHEQGNSLRALKWATDYLIK 134          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.524e-24
Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 2
Query:  476 ITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            I LIV ++ R     A   NY  AL  +L++F AQRSGKLP +  V+WRG+S L+DG  A      DL GG+YDAGD +KF FP +FT TML+WS IE +++  A  E  +    +KW TDY +K
Sbjct:   18 IVLIVMSMARE----AVSTNYAEALKNSLLYFEAQRSGKLPPNQRVTWRGDSALRDGSDAHI----DLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMASQLRAHHEKGNALRALKWATDYLIK 134          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.593e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 2
Query:  536 YTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            Y  AL+K+++FF  QRSGKLP +  V WR +S L DG  A+ +    L+GG+YDAGD +KF +P SFT T+LSW+ IEY  +  +  +L +++  IKWGTD+ L+
Sbjct:   24 YGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGSLANVN----LIGGYYDAGDNVKFVWPMSFTTTLLSWAAIEYQNEISSVNQLGYLRSTIKWGTDFILR 124          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNG_CLOCE (Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.253e-23
Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 2
Query:  458 ALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            AL    ++ +V  +P+ +   A   NY  AL K++MF+  QRSG LP     +WR +S +KDG    S +  DL GG+YDAGD +KFN P S+T  ML+WS+ E    Y+ +G+  ++ + IKW  DYF+K
Sbjct:   15 ALSISILSSLVSFIPQTNTYAAGTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDG----SDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIK 141          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN14_ORYSJ (Endoglucanase 14 OS=Oryza sativa subsp. japonica GN=Os05g0129200 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.253e-23
Identity = 64/161 (39.75%), Postives = 86/161 (53.42%), Query Frame = 2
Query:  461 LLAGFITLIV---KTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKS---------ASSSISK-------------DLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHHSA 868
            +LA  I L+V     + R  H H    +Y  AL  +L++F  QRSG+LP    V WR +S L DG            SS++S              DL GG+YD+GD +KF FP +FT+  LSWSV+EY  + +AAGEL H  + ++WG DY L   H SA
Sbjct:    1 MLAAAIELVVIATSCMVRDAHGH----DYRAALAMSLLYFEGQRSGRLPPAQRVQWRADSALADGADHRVPDLASPPSSNVSVCARTDAMQCDMQVDLTGGYYDSGDNVKFGFPMAFTVAALSWSVVEYGDRLDAAGELGHALDAVRWGADY-LTRAHASA 156          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNA_CALSA (Endoglucanase A OS=Caldocellum saccharolyticum GN=celA PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23
Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 2
Query:  473 FITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            FI  +V  V     + A   NY  AL KA+MF+  Q SGKLP     +WRG+S LKDG+        DL GG++DAGD +KFN P S+T TMLSW+  EY   +  +G+L H+   I+W  DYF+K
Sbjct:    7 FILGVVYGVKPWQEARAGSFNYGEALQKAIMFYEFQMSGKLPNWVRNNWRGDSALKDGQDNGL----DLTGGWFDAGDHVKFNLPMSYTGTMLSWAAYEYKDAFVKSGQLEHILNQIEWVNDYFVK 128          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNI_CLOTH (Endoglucanase 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celI PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.137e-23
Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKL-PKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL KA+ F+  QRSGKL P    ++WRG+S L DGK A      DL GG+YDAGD +KFN P S++  ML W+V EY   ++ +G+ NH+   IKW  DYF+K
Sbjct:   77 NYGEALQKAIFFYECQRSGKLDPSTLRLNWRGDSGLDDGKDAGI----DLTGGWYDAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIK 179          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN8_ARATH (Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL K+++FF  QRSGKLP    + WR +S L+DG SA      DL GG+YDAGD IKF FP +FT TMLSWS+I++        EL +  + +KWGTDY LK
Sbjct:   28 DYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGV----DLSGGYYDAGDNIKFGFPMAFTTTMLSWSIIDFGK--TMGPELRNAVKAVKWGTDYLLK 127          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN22_ARATH (Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38990 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 57/132 (43.18%), Postives = 87/132 (65.91%), Query Frame = 2
Query:  461 LLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTL 856
            L+  FI +++  +P    SH    +Y+ AL K+++FF  QRSG LP+   ++WR NS L DGK+    ++ DLVGG+YDAGD IKF+FP +FT TML+WS I++ + Y +  +L      ++WG++Y LKT+
Sbjct:    4 LVCSFIVILLILLPTTI-SH----DYSDALTKSILFFEGQRSGYLPREQRMTWRHNSALNDGKN----LNVDLVGGYYDAGDNIKFHFPMAFTTTMLAWSAIDFGS-YMSPADLRDNLVALRWGSNYLLKTV 125          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNB_CELFI (Endoglucanase B OS=Cellulomonas fimi GN=cenB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K++ F+ AQRSG LP    VSWRG+S L DG    + + KDL GG+YDAGD +KF FP +F+ TML+W  IE    Y  AG L+ +K+ +++ +DYF+K
Sbjct:   38 NYAEALQKSMFFYQAQRSGDLPADFPVSWRGDSGLTDG----ADVGKDLTGGWYDAGDHVKFGFPMAFSATMLAWGAIESPTGYSKAGSLDELKDNLRFVSDYFVK 139          
The following BLAST results are available for this feature:
BLAST of CK934604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN12_ARATH1.933e-2451.89Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN13_ARATH2.524e-2447.20Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN20_ARATH9.593e-2447.62Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23... [more]
GUNG_CLOCE1.253e-2341.22Endoglucanase G OS=Clostridium cellulolyticum (str... [more]
GUN14_ORYSJ1.253e-2339.75Endoglucanase 14 OS=Oryza sativa subsp. japonica G... [more]
GUNA_CALSA1.636e-2345.24Endoglucanase A OS=Caldocellum saccharolyticum GN=... [more]
GUNI_CLOTH2.137e-2349.53Endoglucanase 1 OS=Clostridium thermocellum (strai... [more]
GUN8_ARATH2.791e-2350.94Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE... [more]
GUN22_ARATH2.791e-2343.18Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38... [more]
GUNB_CELFI3.645e-2349.06Endoglucanase B OS=Cellulomonas fimi GN=cenB PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_A05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934604 ID=CK934604; Name=CK934604; organism=Citrus sinensis; type=EST; length=876bp
GGGATGGAAAAATTCAGCAAGTAATTTGACAGNNNGATCAGAGCACCACC
GTCACCACCAAATCACACCACACAACTCTACAAAACCAGACCGGAGCATT
CACAGTACAAACTTTCCATCTTAATTCTTGAGAGAGAAAGAGATCTAACA
TATCTTTAGCTGAGGGGAGAGTGAGTGAGTGTGAGATTTGATTTGGTAAC
AAACAATGAGTATGTTTGGAAGAGATCCGTGGGGTGGCCCACTGGAGATC
AACGCGGCGGACTCAGCCACTGACGACGATCGGAGCAGGAACCTTCAGGA
TTTCGACAGGGCAGCTCTGTCTCGGCCCTTGGATGAGACCCAGCAGAGCT
GGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAGTACGTAGATCTGGGT
TGCATCATCGTCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACTCTTCT
CGTCTCCGCACTCTTAGCCGGCTTCATCACTCTTATTGTCAAAACGGTGC
CGCGTCATCACCACTCTCATGCTCGCCCTGATAATTACACTCTCGCTTTG
CACAAGGCCCTCATGTTCTTCAATGCCCAACGATCTGGCAAATTACCCAA
GCATAATAACGTTTCTTGGAGGGGAAATTCTTGTCTGAAGGATGGCAAAT
CGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGGGGTTTTTACGATGCT
GGGGATGCCATTAAGTTTAATTTTCCTCAATCTTTTACTATTACCATGCT
CAGCTGGAGTGTGATTGAGTACAGTGCTAAGTACGAAGCTGCTGGTGAGC
TTAACCATGTTAAGGAAATTATCAAGTGGGGTACTGATTACTTTCTCAAG
ACCCTTCATCACTCTGCTGATTCCAT
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