CK934604

Overview
NameCK934604
Unique NameCK934604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN9_ARATH (Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K+L+FF  QRSG LP+   +SWR +S L DG +A      DL GG+YDAGD +KFN P +FT TMLSWS +EY  +     EL + +  I+W TDY LK
Sbjct:   24 NYKEALSKSLLFFQGQRSGPLPRGQQISWRASSGLSDGSAAHV----DLTGGYYDAGDNVKFNLPMAFTTTMLSWSALEYGKR--MGPELENARVNIRWATDYLLK 123          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN4_ARATH (Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL K+++FF  QRSGKLP    + WR +S L+DG SA      DL GG+YDAGD +KF FP +FT TM+SWSVI++        EL +  + IKWGTDY +K
Sbjct:   28 DYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGV----DLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFGK--TMGPELENAVKAIKWGTDYLMK 127          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSJ (Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 51/106 (48.11%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  A  K L+FF AQRSGKLP    V WRG+S L DG S       DLVGG+YD+GD +KF  P ++ +TMLSW V+E+  +     +L+ V + I+WGT+YF+K
Sbjct:   38 DYAGAFDKCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQGV----DLVGGYYDSGDHVKFGLPMAYAVTMLSWGVVEFEKEMVDGNKLHRVLDAIRWGTNYFVK 139          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSI (Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 51/106 (48.11%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  A  K L+FF AQRSGKLP    V WRG+S L DG S       DLVGG+YD+GD +KF  P ++ +TMLSW V+E+  +     +L+ V + I+WGT+YF+K
Sbjct:   38 DYAGAFDKCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQGV----DLVGGYYDSGDHVKFGLPMAYAVTMLSWGVVEFEKEMVDGNKLHRVLDAIRWGTNYFVK 139          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN18_ARATH (Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09740 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.121e-23
Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  AL+K+++FF  QRSGKLP +  V WR +S L DG SA+ +    L+GG+YDAGD +KF +P SFT T+LSW+ +EY  +     +L +++  IKWGT++ L+
Sbjct:   23 DYGDALNKSILFFEGQRSGKLPTNQRVKWRADSGLSDGASANVN----LIGGYYDAGDNVKFVWPMSFTTTLLSWAALEYQNEITFVNQLGYLRSTIKWGTNFILR 124          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 56/128 (43.75%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEA--------------AGELNHVKEIIKWGTDYFLKTLHHSADS 874
            NY  AL KA++FF AQRSGKLP    V+WR +S L DG    S+   DL GG+YDAGD +KF  P +FT+TMLSWSVIE+     A                +L++ +  ++WG DY LK    + D+
Sbjct:   24 NYADALDKAILFFEAQRSGKLPPGQRVAWRADSGLSDG----SADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDMMPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDT 147          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN15_ARATH (Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44570 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K+L++F AQRSGKLP    V WRG+S L+DG  A      DL GG+YDAGD +KF FP +FT TML+WS +E  ++ +A  E  +    ++W TDY +K
Sbjct:   33 NYGEALTKSLLYFEAQRSGKLPLDQRVIWRGDSALRDGSDAHV----DLTGGYYDAGDNMKFGFPLAFTTTMLAWSSVEMESQLKAHQEHGNTLAALRWATDYLIK 134          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN14_ARATH (Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44560 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.385e-22
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K+L++F AQRSGKLP +  V+WRG+S L+DG  A      DL GG+YDAGD +KF FP +F  TML+WS IE + + +A  E  +    +KW TD+ +K
Sbjct:   33 NYGDALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHV----DLTGGYYDAGDNMKFGFPLAFFTTMLAWSNIEMATQLKAHQEQENALAALKWATDFLIK 134          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUNZ_CLOSR (Endoglucanase Z OS=Clostridium stercorarium GN=celZ PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL KA+MF+  QRSGKLP++   +WRG+S L DG    + +  DL GG+YDAGD +KFN P +++ TML+W+  E     E +G++ ++ + IKW +DY +K
Sbjct:   31 NYGEALQKAIMFYEFQRSGKLPENKRDNWRGDSGLNDG----ADVGLDLTGGWYDAGDHVKFNLPMAYSQTMLAWAAYEAEEALERSGQMGYLLDAIKWVSDYLIK 132          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            NY  AL K  +FF AQRSGKLP    V WRG S LKDG +   S+     GG+YDAGD +KF  P +F +TMLSW+ ++   +  ++ ++      I+WGTDYF+K
Sbjct:   30 NYGSALDKTFLFFEAQRSGKLPAAQRVKWRGPSGLKDGLAQGVSLE----GGYYDAGDHVKFGLPMAFAVTMLSWAAVDNRKELSSSNQMQQTLWSIRWGTDYFIK 131          
The following BLAST results are available for this feature:
BLAST of CK934604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN9_ARATH3.645e-2350.94Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE... [more]
GUN4_ARATH3.645e-2350.00Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g232... [more]
GUN13_ORYSJ4.761e-2348.11Endoglucanase 13 OS=Oryza sativa subsp. japonica G... [more]
GUN13_ORYSI4.761e-2348.11Endoglucanase 13 OS=Oryza sativa subsp. indica GN=... [more]
GUN18_ARATH8.121e-2346.23Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09... [more]
GUN4_ORYSJ1.061e-2243.75Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN15_ARATH1.061e-2249.06Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN14_ARATH1.385e-2249.06Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44... [more]
GUNZ_CLOSR4.030e-2245.28Endoglucanase Z OS=Clostridium stercorarium GN=cel... [more]
GUN5_ARATH4.030e-2246.23Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g489... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_A05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934604 ID=CK934604; Name=CK934604; organism=Citrus sinensis; type=EST; length=876bp
GGGATGGAAAAATTCAGCAAGTAATTTGACAGNNNGATCAGAGCACCACC
GTCACCACCAAATCACACCACACAACTCTACAAAACCAGACCGGAGCATT
CACAGTACAAACTTTCCATCTTAATTCTTGAGAGAGAAAGAGATCTAACA
TATCTTTAGCTGAGGGGAGAGTGAGTGAGTGTGAGATTTGATTTGGTAAC
AAACAATGAGTATGTTTGGAAGAGATCCGTGGGGTGGCCCACTGGAGATC
AACGCGGCGGACTCAGCCACTGACGACGATCGGAGCAGGAACCTTCAGGA
TTTCGACAGGGCAGCTCTGTCTCGGCCCTTGGATGAGACCCAGCAGAGCT
GGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAGTACGTAGATCTGGGT
TGCATCATCGTCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACTCTTCT
CGTCTCCGCACTCTTAGCCGGCTTCATCACTCTTATTGTCAAAACGGTGC
CGCGTCATCACCACTCTCATGCTCGCCCTGATAATTACACTCTCGCTTTG
CACAAGGCCCTCATGTTCTTCAATGCCCAACGATCTGGCAAATTACCCAA
GCATAATAACGTTTCTTGGAGGGGAAATTCTTGTCTGAAGGATGGCAAAT
CGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGGGGTTTTTACGATGCT
GGGGATGCCATTAAGTTTAATTTTCCTCAATCTTTTACTATTACCATGCT
CAGCTGGAGTGTGATTGAGTACAGTGCTAAGTACGAAGCTGCTGGTGAGC
TTAACCATGTTAAGGAAATTATCAAGTGGGGTACTGATTACTTTCTCAAG
ACCCTTCATCACTCTGCTGATTCCAT
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