CK934604

Overview
NameCK934604
Unique NameCK934604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 48/114 (42.11%), Postives = 74/114 (64.91%), Query Frame = 2
Query:  515 SHARPDNYTLA--LHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            S + P NY  A  L KA++FF  QRSGKLP    V WR +S L DGK  + +    L+GG+YDAGD +KF +P +F+ ++LSW+ +EY ++  +  +L +++  I+WG D+ L+
Sbjct:   32 SSSGPPNYDYADALAKAILFFEGQRSGKLPSSQRVKWREDSALSDGKLQNVN----LMGGYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEISSVNQLGYLQSAIRWGADFMLR 141          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN11_ORYSJ (Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  431 WTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            W    L+ +A+L+    ++V      H     PD Y  AL K+++FF  QRSG+LP    V WR NS L DG +A+     DL GG+YD GD +KF FP +FT TMLSW V+EY  +      L   ++ ++W  DY L+
Sbjct:   13 WRALVLVAAAVLSFSGHVVVAAAAAGH-----PD-YADALAKSILFFQGQRSGRLPPDQAVKWRSNSGLSDGSAANV----DLTGGYYDGGDNVKFGFPMAFTTTMLSWGVVEYGGRMRGR-VLRDARDAVRWAADYLLR 141          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN1_PERAE (Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 50/114 (43.86%), Postives = 74/114 (64.91%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHHSADS 874
            +Y+ AL K+++FF  QRSGKLP +  ++WRG+S L DG    SS   DLVGG+YDAGD +KF  P +FT TML+W +IE+        ++ + +  ++W TDY LK    +++S
Sbjct:   29 HYSDALEKSILFFEGQRSGKLPTNQRLTWRGDSGLSDG----SSYHVDLVGGYYDAGDNLKFGLPMAFTTTMLAWGIIEFGCLMPE--QVENARAALRWSTDYLLKASTATSNS 136          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN10_ARATH (Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  536 YTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHHSADS 874
            Y  AL  AL FF+ Q+SGKL ++N + WRG+S LKDG   +  +SK    G YDAGD IKF FP +FT T+LSWS++EY  +  A  +L+  K+ ++W TDY +K   H +D+
Sbjct:   58 YADALKLALQFFDIQKSGKL-ENNKIPWRGDSGLKDGSEDNLDLSK----GLYDAGDHIKFGFPMAFTATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKA--HPSDN 163          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN19_ORYSJ (Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 2
Query:  515 SHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            S A   NY  AL K+++FF  QRSGKLP  N + WR +S L DG    +  + DLVGG+YDAGD +KF  P +F+ TML+WSV+++  K+  A EL + +  ++WG DY LK
Sbjct:   48 SSAMAFNYADALAKSIIFFEGQRSGKLPPGNRMPWRADSGLTDG----AQYNVDLVGGYYDAGDNVKFGLPMAFSTTMLAWSVLDF-GKFMGA-ELPNARAAVRWGADYLLK 153          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN23_ORYSJ (Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNN-VSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHH 862
            +Y  AL K+++FF  QRSG+LP      +WRG+S + DG +A      DL GG+YDAGD +KF FP +FT TML+W V+E+      A E  H  + ++W TDY LKT+ H
Sbjct:   41 DYGDALAKSILFFEGQRSGRLPAAGQRAAWRGDSAVSDGGAAGV----DLEGGYYDAGDNVKFGFPMAFTATMLAWGVVEFGDAMPPA-ERAHAADAVRWATDYLLKTISH 146          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN17_ORYSJ (Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.612e-21
Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y+ ALHK+++FF  QRSG+LP    + WR +S L DG +A      DL GG+YDAGD +KF FP +FT T++SW +I++   + A       +E ++W TDY +K
Sbjct:   24 DYSDALHKSILFFEGQRSGRLPPDQRLRWRRDSALNDGATAGV----DLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGA--HAAEAREAVRWATDYLMK 123          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN24_ARATH (Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.601e-21
Identity = 49/108 (45.37%), Postives = 73/108 (67.59%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTL 856
            +Y+ AL K+++FF  QRSG LP    ++WR NS L DG + +     DL GG+YDAGD +KFNFP +FT TML+WSVIE+  ++  + EL +    ++W ++Y LK++
Sbjct:   29 DYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNI----DLTGGYYDAGDNVKFNFPMAFTTTMLAWSVIEF-GEFMPSSELRNSLVALRWSSNYLLKSV 131          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20
Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  533 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLK 850
            +Y  ALHK+++FF  QRSG+LP    + WR +S L DG +AS     DL GG+YDAGD +KF FP +FT T++SW +I++   +    E    ++ ++W TDY +K
Sbjct:   36 DYGDALHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASV----DLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGPHKE--EARKAVRWATDYLMK 135          
BLAST of CK934604 vs. ExPASy Swiss-Prot
Match: GUN24_ORYSJ (Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20
Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 2
Query:  488 VKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTLHHSADS 874
            +K +P      A    Y  AL  AL FF  Q++GKL ++N + WRG+S L DGK A   +SK    G YDAGD IKF+FP +FT T+LSWS++EY  +  A  +L+   + ++W TD+ +    H +D+
Sbjct:   42 LKPLPVPGPPGAIDSKYGDALGVALQFFQVQKAGKL-ENNQIPWRGDSALDDGKPAGLDLSK----GMYDAGDHIKFSFPMAFTATVLSWSILEYGDQMSATKQLDPALDALRWITDFLVNA--HPSDN 163          
The following BLAST results are available for this feature:
BLAST of CK934604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN_PHAVU5.264e-2242.11Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2[more]
GUN11_ORYSJ6.875e-2240.00Endoglucanase 11 OS=Oryza sativa subsp. japonica G... [more]
GUN1_PERAE8.979e-2243.86Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 S... [more]
GUN10_ARATH1.173e-2146.90Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75... [more]
GUN19_ORYSJ1.532e-2147.32Endoglucanase 19 OS=Oryza sativa subsp. japonica G... [more]
GUN23_ORYSJ2.000e-2145.95Endoglucanase 23 OS=Oryza sativa subsp. japonica G... [more]
GUN17_ORYSJ2.612e-2143.40Endoglucanase 17 OS=Oryza sativa subsp. japonica G... [more]
GUN24_ARATH7.601e-2145.37Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN6_ORYSJ2.211e-2043.40Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN24_ORYSJ8.404e-2041.09Endoglucanase 24 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_A05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934604 ID=CK934604; Name=CK934604; organism=Citrus sinensis; type=EST; length=876bp
GGGATGGAAAAATTCAGCAAGTAATTTGACAGNNNGATCAGAGCACCACC
GTCACCACCAAATCACACCACACAACTCTACAAAACCAGACCGGAGCATT
CACAGTACAAACTTTCCATCTTAATTCTTGAGAGAGAAAGAGATCTAACA
TATCTTTAGCTGAGGGGAGAGTGAGTGAGTGTGAGATTTGATTTGGTAAC
AAACAATGAGTATGTTTGGAAGAGATCCGTGGGGTGGCCCACTGGAGATC
AACGCGGCGGACTCAGCCACTGACGACGATCGGAGCAGGAACCTTCAGGA
TTTCGACAGGGCAGCTCTGTCTCGGCCCTTGGATGAGACCCAGCAGAGCT
GGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAGTACGTAGATCTGGGT
TGCATCATCGTCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACTCTTCT
CGTCTCCGCACTCTTAGCCGGCTTCATCACTCTTATTGTCAAAACGGTGC
CGCGTCATCACCACTCTCATGCTCGCCCTGATAATTACACTCTCGCTTTG
CACAAGGCCCTCATGTTCTTCAATGCCCAACGATCTGGCAAATTACCCAA
GCATAATAACGTTTCTTGGAGGGGAAATTCTTGTCTGAAGGATGGCAAAT
CGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGGGGTTTTTACGATGCT
GGGGATGCCATTAAGTTTAATTTTCCTCAATCTTTTACTATTACCATGCT
CAGCTGGAGTGTGATTGAGTACAGTGCTAAGTACGAAGCTGCTGGTGAGC
TTAACCATGTTAAGGAAATTATCAAGTGGGGTACTGATTACTTTCTCAAG
ACCCTTCATCACTCTGCTGATTCCAT
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