CK934649

Overview
NameCK934649
Unique NameCK934649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934649 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 33/101 (32.67%), Postives = 55/101 (54.46%), Query Frame = 3
Query:  231 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSFKELAEQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKGVLDEEV 533
            PH + A +A+K GP+ Y+++G     V S  E A+  LKT D  F++RP    A H++    D+ F+  GP W+  RK+    +L  K +  ++ V  +E+
Sbjct:   57 PHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKEL 157          
BLAST of CK934649 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 40/153 (26.14%), Postives = 73/153 (47.71%), Query Frame = 3
Query:  192 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSFKELAEQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICV-TELLSPKRVNSFKGVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRF 647
            ++G L    +   PHK+F KL +K GPI+  +LG    V+V   +LA++VL    + F+ RP +++   +S     + F+ +G  W+  RK+ + T  L        + ++  E++     +  + G   D+   +F   T+  CL  F   F
Sbjct:   36 LVGSLLFLPRSGHPHKNFFKLQKKYGPIYSFRLGTKTTVMVGDHQLAKEVLVKKGKEFSGRPHVVTLDILSDNQKGIAFADHGASWQMHRKLALATFALFKDGDQRLEKIICREISLLCDNLAMQDGQSIDLYLPLFLAVTNIICLICFNSSF 188          
The following BLAST results are available for this feature:
BLAST of CK934649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
C75A5_EUSGR7.084e-1132.67Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
CP17A_FELCA9.252e-1126.14Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004228_E02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934649 ID=CK934649; Name=CK934649; organism=Citrus sinensis; type=EST; length=741bp
GGGGGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTT
GAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGT
TGTCTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGC
CAAATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGT
CACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAA
ACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCC
CCGCCGTTGTAGTCTCCTTTAAAGAGCTGGCCGAACAAGTTCTCAAAACT
CACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCGCCAAGCACGT
CTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGC
GCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTC
AACTCTTTCAAAGGCGTCCTAGATGAGGAAGTGAACCGGTTTATGAGCCG
CGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCG
CCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGGGGTGAGGTTCATG
GAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGGCGAGTGTTTTCAT
AGANGTTGAAGAGTTGCTGACAGGGTTTTATTATGGGGATT
back to top