CK934656

Overview
NameCK934656
Unique NameCK934656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934656_ssr5 microsatellite CK934656_ssr5:5..16. BLAST: Citrus ESTs to Prunus persica proteins V1
CK934656_ssr22 microsatellite CK934656_ssr22:22..36. BLAST: Citrus ESTs to Prunus persica proteins V1
CK934656_ssr33 microsatellite CK934656_ssr33:33..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:68..995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 87/236 (36.86%), Postives = 126/236 (53.39%), Query Frame = 2
Query:  134 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            M EL+  +F RA+ AEF+ATLLF++  + + +   +   +     +L IA AFG  I  LV     ISG HINPAVT    +   VS++RA  Y+ AQ LGA+ G  L+      +        N +++    G A+  E+  T  LV  +F++TD +R       P    L IGF+V + HL  I  TG  +NPARS   AV+      +DDHW+FW+GP VGA+  +  + Y+L
Sbjct:    1 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRG-DLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.250e-33
Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 2
Query:  164 RALIAEFVATLLFLYVSVATVIGHKKQ---------SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            RA +AEF++T +F++    +++   K          ++  GG+ L+ +A A    +F  V     +SGGH+NPAVTF   +  ++S+IRA+ Y VAQ +GAI    L    ++   N L      VASG ++   L  EII TF LVY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+FG A++      W +HWI+WVGPF+G   AA  ++Y++
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAI----LACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.250e-33
Identity = 91/240 (37.92%), Postives = 133/240 (55.42%), Query Frame = 2
Query:  134 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN--SLGG--GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            M EL+  +F RA++AEF+ATLLF++  + + +   +   +     +L IA AFG  I  LV     +SG HINPAVT    +   VS +RAV Y+ AQ LGA+ G  L+     HE    ++ G    N + +    G A+  E+  T  LV  +F++TD +R     +V   A L IGF+V + HL  I  TG  +NPARS   A++      +DDHW+FW+GP VGA+ A+  + Y+L
Sbjct:    1 MWELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL-----HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRG---DNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.544e-33
Identity = 88/236 (37.29%), Postives = 128/236 (54.24%), Query Frame = 2
Query:  164 RALIAEFVATLLFLYVSVATVIG-----HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            RA I+EF+AT +F++ +  +V+      H   + +  G GL+ +A A    + V V     +SGGH+NPAVTFG  +  +VSL+RAV Y  AQ LGA+    L++           GGA      +ASG   G A+  E + TF  VY  + +  DPKR     H+  +APL +GF +    LA  P  G G+NPAR FG A++      W  HW++W+GPF+GA  A   ++Y+L
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAG-GLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRL--------ATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.544e-33
Identity = 81/231 (35.06%), Postives = 123/231 (53.25%), Query Frame = 2
Query:  155 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 847
            + +R L AE + TLL + +   +  G +       G  ++ IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI G  ++K     E+        ++A G         E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARSFG AV  N D  W +HW++W GP VG + A   ++ + RA
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISE----GDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGT-LCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.544e-33
Identity = 81/234 (34.62%), Postives = 124/234 (52.99%), Query Frame = 2
Query:  155 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGG---VGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 844
            + +R L+AEF+ T   + + + + +G        GG     +  IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI G  L+KA    +   +GG G   +      G  +  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARSFG AV+  N   W D W++WVGP VG + A A ++   +
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGW-------GGDYAPTMTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDV--IGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.241e-33
Identity = 83/236 (35.17%), Postives = 128/236 (54.24%), Query Frame = 2
Query:  134 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            M EL+  SF+RA+ AEF ATL +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YM AQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G   A+  + ++L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLASLLYDFLL 223          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.613e-32
Identity = 81/228 (35.53%), Postives = 127/228 (55.70%), Query Frame = 2
Query:  164 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 838
            +A +AEF++T +F++    + I + K ++  A    GL+  + A    +FV V   A ISGGH+NPAVTFG F+   ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA SFG AV+     +W +HW++W GP +G   A   ++ +
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.613e-32
Identity = 83/236 (35.17%), Postives = 129/236 (54.66%), Query Frame = 2
Query:  134 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            M EL+  SF+RA+ AEF ATL +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ Y+VAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +GA   +  + ++L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of CK934656 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.107e-32
Identity = 83/236 (35.17%), Postives = 129/236 (54.66%), Query Frame = 2
Query:  134 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 841
            M EL+  SF+RA+ AEF A+L +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YMVAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +GA   +  + ++L
Sbjct:    1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          
The following BLAST results are available for this feature:
BLAST of CK934656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQP2_HUMAN2.489e-3336.86Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
TIP32_ARATH3.250e-3337.29Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP2_BOVIN3.250e-3337.92Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP32_MAIZE5.544e-3337.29Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQP_CICVR5.544e-3335.06Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP_AEDAE5.544e-3334.62Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
MIP_RABIT7.241e-3335.17Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP1_MEDTR1.613e-3235.53Probable aquaporin TIP-type OS=Medicago truncatula... [more]
MIP_SHEEP1.613e-3235.17Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_BOVIN2.107e-3235.17Lens fiber major intrinsic protein OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934656 ID=CK934656; Name=CK934656; organism=Citrus sinensis; type=EST; length=928bp
GGGGGAAGAAGAAGAAGANNNAGAAGAAGAAGAAGAAAGAAAGATGTCAA
AGGAAGTGAATGAAGAAGGACAAACTCACCGCCATCACCATGGCAAGGAC
TACGTGGACCCACCACCAGCACCACTCATTGACATGGCTGAGCTCAAGCT
CTGGTCCTTTTACAGAGCTCTCATAGCCGAGTTCGTGGCCACTCTCCTCT
TCCTCTACGTCAGTGTTGCCACTGTCATTGGCCACAAGAAACAAAGTGAT
GCCTGTGGTGGTGTTGGCCTTTTGGGTATTGCATGGGCCTTTGGTGGCAT
GATCTTCGTCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCACATTA
ACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATC
AGGGCTGTGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGT
TGGTTTGGTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTG
GTGCTAACACCGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCT
GAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGA
CCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTC
CAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACT
GGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTACAA
CAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTTTCG
TTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCTGCT
GCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTTCAACTANGAAAG
CAAATTATGATGAATATGAACCNNNAAC
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