CK934660

Overview
NameCK934660
Unique NameCK934660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3465 contig Csv1_Contig3465:72..959. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.874e-39
Identity = 90/202 (44.55%), Postives = 118/202 (58.42%), Query Frame = 1
Query:   55 SFWILFFLLLITMATA-DPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVAL-SGSHSIGQGRCFSIMFRL 654
            S   LFFL      +A   LR G+YS +CP AESIV  V+      +    A+ +R QFHDCFV GCDAS+L+D  P    EK +  N  S+R YE+IDE K  LE ACP TVSCADI+ +A+RD+VAL+GGP + V  GR+D L ++  D +  +P P    S  + LFA   ++  D+V L  G HS+G   C     RL
Sbjct:    3 SITALFFLFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPNDVN--LPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.366e-39
Identity = 85/199 (42.71%), Postives = 119/199 (59.80%), Query Frame = 1
Query:   64 ILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            + FFL+ I       L+  +Y+ +CP AE IV D +   +   P   A+++R  FHDCFV GCD S+L++ T     E+ +  N+ ++R +  ID +K  LE  CPG VSCADII +ASRDAV  +GGP+W V  GR+D   ++  +A   +P P +N + L  LFA   L +KDLV LSG+H+IG   C S   RLYN
Sbjct:   11 VSFFLVGIVGPIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNL-TVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYN 207          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.962e-39
Identity = 75/181 (41.44%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  121 YYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSL-TASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            YY +TCP+ E IV   +    I +P S A+++R  FHDC V GCDAS+LL+        +L  +    +R  +++  +K +LE  CP  VSC+D+II+A+RDAVAL+GGP   V LGRKDSL T S+  AD  +P   A+    + LFA   ++I++ VA+ G+H+IG   C +++ R  N
Sbjct:   42 YYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDN 222          

HSP 2 Score: 37.3502 bits (85), Expect = 6.962e-39
Identity = 23/70 (32.86%), Postives = 29/70 (41.43%), Query Frame = 2
Query:  683 DPAIEXKFREKLNRLCPIGGDGNVT-VDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            DP  +   R       P       T V  D T   FD  Y+ D  AGRG L  D  +   P TRP+V+ +
Sbjct:  231 DPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAF 300          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.086e-38
Identity = 83/178 (46.63%), Postives = 115/178 (64.61%), Query Frame = 1
Query:  121 YYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRL 654
            YY  +CP AE IV + +  A+  +P   A ++R  FHDCF+ GCDAS+LLD T     EK S +N+ SLR YE+ID+ KE +E  CPG VSCADI+ MA+RDAV  +GGP +++  GR D   +  +D  + +PSP  NAS L+  F +   + +D+VALSG+H++G  RC S   RL
Sbjct:   30 YYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL 205          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.006e-38
Identity = 77/210 (36.67%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   46 KKMSFWILFFLLLITMATADP-LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLL----DDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            K M  W L  LL   +A ++  L   YY+ TCP  E IV   +     +   +  + +R  FHDCFV GCDAS+ +    +D      +  SL+       ++ + + K A+E  CPG VSCADI+ +A+RD V L GGP ++V+LGR+D L +        +P P  +   LV +FA   LS+ D++ALSG+H+IG   C     RL+N
Sbjct:   10 KPMMMWFLGMLLFSMVAESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAG----DGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHN 215          

HSP 2 Score: 37.3502 bits (85), Expect = 2.006e-38
Identity = 18/58 (31.03%), Postives = 34/58 (58.62%), Query Frame = 2
Query:  683 DPAIEXKFREKLNRLCPIGGDGNVTVDLDATPQ-AFDNQYFKDLAAGRGFLNSDETLY 853
            DP ++  + ++L + C    + +  VD+D T +  FDN Y+++L A +G   SD+ L+
Sbjct:  223 DPTMDPVYAQQLIQACS-DPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALF 279          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 2.607e-38
Identity = 75/180 (41.67%), Postives = 109/180 (60.56%), Query Frame = 1
Query:  121 YYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            YY E+CP AE I+   I       P     ++R  FHDCF+ GCDAS+LLD       EK +  N+ SL+ ++VID VK  LE  CPG VSCAD++++A+R+AV ++GGP + ++ GRKDS  A +  A+  +P+P A  S ++  F+    + ++ V+L G+HSIG   C     RLYN
Sbjct:   72 YYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYN 250          

HSP 2 Score: 31.5722 bits (70), Expect = 2.607e-38
Identity = 24/111 (21.62%), Postives = 40/111 (36.04%), Query Frame = 2
Query:  665 SGSGKPDPAIEXKFREKLNRLCPI--------------------------------GGDGNVTVDL----DATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            S +GKPDP +   F ++L   CP                                 G   +  +DL    +   + F  +YF+ L   +G ++SD+ L     T  +V+ Y
Sbjct:  252 SATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAY 362          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.048e-37
Identity = 79/195 (40.51%), Postives = 121/195 (62.05%), Query Frame = 1
Query:   79 LLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTM-LGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            LL+       LR G+Y  +CP AE++V   +  A  ++    A ++R  FHDCFV GCD S+LL   P     E+ +L N  SLR ++VID  K A+E++CP TVSCADI+  A+RD+++L+G  S++V  GR+D   ++  +  D +P P + A  L DLF   +LS++D+V LSG+H++G+  C S   R++N
Sbjct:   25 LLLPATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNATETVD-LPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWN 218          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 4.796e-37
Identity = 71/217 (32.72%), Postives = 117/217 (53.92%), Query Frame = 1
Query:   46 KKMSFWILFFLLLITMATA--DPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLL--------DDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKA--CPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            K  S + +  LLLI  +++    L+  +Y ++CP  E+IV + + +   +   +  + +R  FHDCFV GCDAS+LL         D  ++ G+            ++ + + K+AL++   C   VSCADI+ +A+RD V L+GGP++ V+LGR+D   ++       +P P      L  +FA+  LS  D++ALSG+H+IG   C     R+YN
Sbjct:    2 KNQSSFSIVALLLIFFSSSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDHPDDKSLAGD-----------GFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYN 207          

HSP 2 Score: 52.373 bits (124), Expect = 4.796e-37
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 2
Query:  683 DPAIEXKFREKLNRLCPIGGDGNVTVDLDAT-PQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            DP +  ++  +L ++CPI  D  + +++D T P  FDN YFK+L  G G   SD+ L++   +R  V  +
Sbjct:  215 DPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSF 284          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.976e-36
Identity = 70/206 (33.98%), Postives = 114/206 (55.34%), Query Frame = 1
Query:   55 SFWILFFLLLITMATADP-LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLR--SYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQ 663
            SF +  F+L+ +       L   YY++TCPE E  +  ++    I  P +    +R  FHDC V+GCDAS+L+  TP    E+ +  N  SL   +++VI  +K A+E  CP  VSC+DI++ A+R  +++ GGP   VK GRKDSL +     +  +  P      ++ +F    L+++++VAL G+H+IG   C     R++N+
Sbjct:    3 SFGLCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADIN-RSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNK 207          

HSP 2 Score: 36.965 bits (84), Expect = 3.976e-36
Identity = 24/65 (36.92%), Postives = 32/65 (49.23%), Query Frame = 2
Query:  701 KFREKLNRLCP-IGGDGNVTVDLDA-TPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            K+  +L +LC     D  ++   D  TP  FDN Y+K+L  G G L SD  +     TR  V LY
Sbjct:  219 KYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLY 283          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.179e-36
Identity = 73/187 (39.04%), Postives = 110/187 (58.82%), Query Frame = 1
Query:  100 ADP-LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLY 657
            A+P L   +Y +TCP+AE IV + +     R   +  S +R  FHDC V  CDAS+LLD T   LGEK    +   LR++  I+E+KEALE+ CPG VSC+DI+++++R+ +   GGP   +K GR+D L +     +  +P    + S +++ F    +    LVAL GSHS+G+  C  ++ RLY
Sbjct:   27 AEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFG-LRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLY 212          

HSP 2 Score: 30.0314 bits (66), Expect = 5.179e-36
Identity = 14/37 (37.84%), Postives = 19/37 (51.35%), Query Frame = 2
Query:  773 TPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVK 883
            TP   DN Y++++   +G L  D  L     TRP VK
Sbjct:  250 TPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVK 286          
The following BLAST results are available for this feature:
BLAST of CK934660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER44_ARATH4.874e-3944.55Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER3_ARATH6.366e-3942.71Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER29_ARATH6.962e-3941.44Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER47_ARATH1.086e-3846.63Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER55_ARATH2.006e-3836.67Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER48_ARATH2.607e-3841.67Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER1_MAIZE2.048e-3740.51Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER16_ARATH4.796e-3732.72Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER6_ARATH3.976e-3633.98Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER42_ARATH5.179e-3639.04Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004228_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934660 ID=CK934660; Name=CK934660; organism=Citrus sinensis; type=EST; length=889bp
GGGGACCCACTTCATTCTGCTTATTTTGCTTATTTTGCAAAGCCCAAGAA
GATGTCGTTTTGGATACTATTCTTCCTTCTACTAATAACCATGGCAACTG
CAGACCCTCTCCGGCCTGGATACTACTCGGAGACCTGCCCGGAAGCAGAA
TCCATCGTCGGAGATGTGATTATGAAGGCCATGATTAGAGAACCAAGAAG
CGGAGCCTCTGTCATGCGGTTCCAGTTCCATGATTGCTTCGTTAATGGTT
GTGATGCTTCTATGTTGCTTGATGACACACCAACGATGCTTGGAGAAAAA
TTGTCTCTTTCGAACATTAATTCGCTGAGATCATACGAAGTCATCGATGA
GGTCAAAGAAGCATTAGAGAAAGCCTGTCCAGGAACCGTTTCTTGTGCTG
ATATCATTATCATGGCCTCAAGAGATGCCGTTGCGCTGAGTGGAGGGCCC
AGCTGGGAAGTGAAGCTGGGAAGAAAAGACAGCTTAACGGCCAGCCAAAA
GGATGCGGACGATATCATGCCAAGCCCTAGAGCCAATGCCAGTTTTCTGG
TTGACCTGTTTGCCAAATTTGATCTCTCCATCAAAGATCTTGTAGCCCTT
TCGGGCTCACACTCTATTGGCCAAGGCCGATGTTTTTCGATCATGTTTAG
GCTATACAATCAGTTCTGGGTCAGGCAAGCCTGACCCTGCCATCGAGNNN
AAGTTCAGAGAAAAGCTAAACAGGCTTTGTCCAATCGGCGGCGATGGGAA
TGTAACAGTAGACCTTGATGCAACACCTCAAGCTTTTGATAACCAATATT
TCAAGGACTTGGCTGCCGGTAGAGGATTTCTGAACTCTGATGAGACGCTG
TATACTTATCCGTGGACTAGACCATATGTGAAGCTTTAT
back to top