CK934660

Overview
NameCK934660
Unique NameCK934660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3465 contig Csv1_Contig3465:72..959. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.468e-35
Identity = 78/184 (42.39%), Postives = 116/184 (63.04%), Query Frame = 1
Query:  109 LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            L  G+YS TCP+AESIV  V+  A + +P   A ++R  FHDCFV GCD S+L+++    + EK +  +   +R +E+++ VK  LE ACPG VSC+DI+ +A+RDA++L+ GP++EV  GR+D   ++   A D MP    +   L   F +  L+ KDLV LS +H+IG   CF +  RLY+
Sbjct:   26 LEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGA--ISEKNAFGH-EGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD-MPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYD 205          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.503e-35
Identity = 78/197 (39.59%), Postives = 115/197 (58.38%), Query Frame = 1
Query:   46 KKMSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVAL-SGSHSIGQGRC 633
            + ++ W   F  L+    A  LR G+Y  TCP AESIVG V+     R     A+++R QFHDC V GCDAS+L+D T     EK S+     +R +E+IDE K+ LE  CP TVSCADI+ +A+RD++AL+GGP ++V+ GR+D L ++  D    +  P  + +  +  F     ++  +VAL  G H++G   C
Sbjct:    2 RAIAAWFFIFCYLVPSVFAQ-LRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVK--LLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHC 194          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.530e-35
Identity = 68/202 (33.66%), Postives = 115/202 (56.93%), Query Frame = 1
Query:   70 FFLLLITMATA-----DPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWE-VKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLY 657
            FF LL+ + +        L   YY E+CP+AE I+   +     +   +  S +R  FHDC V  CDAS+LL+    +  E+ S  +   +R+++ +  +K+ALEK CP TVSCADI+ +++RD + +  GP  E +K GR+DS  +   D + ++P+   + S ++  F    + ++  VAL G+HS+G+  C +++ RLY
Sbjct:   12 FFCLLLQLFSIFHIGNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFG-MRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLY 212          

HSP 2 Score: 38.891 bits (89), Expect = 2.530e-35
Identity = 24/75 (32.00%), Postives = 36/75 (48.00%), Query Frame = 2
Query:  683 DPAIEXKFREKLNRLCPIGGDGNVTVDLDA---------TPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYV 880
            DP ++  +   L + CP     + T D +A         TP   DN Y+K++ A +G L  D+ L T P T P+V
Sbjct:  216 DPTLDPSYALYLKKRCP-----SPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFV 285          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.473e-35
Identity = 69/166 (41.57%), Postives = 111/166 (66.87%), Query Frame = 1
Query:  151 SIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDD-TPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPG-TVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSI 642
            S V  V+  A+  E R GAS++R  FHDCFV+GCD  +LLDD   T  GE+ S  N NS+R +EVI + K+++  +CP  +VSCADI+ +A+RD++A  GG ++ V LGR D+ TA+   A + +P+P  N +  +  F+  + +++++VAL+G+H++G  RC ++
Sbjct:   83 SAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCSTV 248          

HSP 2 Score: 30.8018 bits (68), Expect = 9.473e-35
Identity = 15/42 (35.71%), Postives = 21/42 (50.00%), Query Frame = 2
Query:  764 LDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            LD TP  FD  Y+ +L   +G + SD+ L     T  +V  Y
Sbjct:  276 LDTTPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFVTTY 317          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.234e-34
Identity = 71/166 (42.77%), Postives = 109/166 (65.66%), Query Frame = 1
Query:  151 SIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDD-TPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPG-TVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSI 642
            S V  V+  A+  E R GAS++R  FHDCFV+GCD  +LLDD   T  GE+ S  N NS R YEVI + K+++   CP  +VSCADI+ +A+RD+VA  GG ++ V LGR D+ TA+   A + +P+P  N +  +  F+  + +++++VAL+G+H++G  RC ++
Sbjct:   84 SAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCSTV 249          

HSP 2 Score: 30.0314 bits (66), Expect = 1.234e-34
Identity = 15/42 (35.71%), Postives = 22/42 (52.38%), Query Frame = 2
Query:  764 LDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            LD TP  FD  Y+ +L + +G + SD+ L     T  +V  Y
Sbjct:  277 LDTTPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDY 318          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.731e-34
Identity = 73/190 (38.42%), Postives = 106/190 (55.79%), Query Frame = 1
Query:   64 ILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRC 633
            +L FL  +  ++A+ L   +Y+ +C  AE +V + +  A   +P     ++R  FHDCFV GCDAS+L+    T   EK    N  SL  + VID  K A+E  CP TVSCADI+ +A+RDAV  +GGP  E+  GR+D   +   +    +         ++D F+   LSI+DLV LSG+H+IG   C
Sbjct:   15 LLMFLSSLLTSSAN-LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNST---EKSDPGNA-SLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHC 199          

HSP 2 Score: 36.1946 bits (82), Expect = 2.731e-34
Identity = 20/68 (29.41%), Postives = 32/68 (47.06%), Query Frame = 2
Query:  683 DPAIEXKFREKLNRLCPIGGDGNVTVDLDA-TPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVK 883
            D +++  + E L   C      ++TV  D  T   FDNQY+++L   +G   +D  L     TR  V+
Sbjct:  218 DASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVE 285          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.615e-34
Identity = 79/194 (40.72%), Postives = 111/194 (57.22%), Query Frame = 1
Query:   94 ATADP-----LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            ATA P      R G+Y  TCP AE+IV + +      +PR    ++R  FHDCFV GCD S+L+    T   E+ +  N+N L+ +EVID  K  LE ACPG VSCADI+ +A+RD V L+ G  W+V  GR+D   +   +A++ +P PR + +     F+   L+ +DLV L G H+IG   C     RL+N
Sbjct:   25 ATARPGPVSGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFN 213          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.628e-34
Identity = 63/162 (38.89%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  151 SIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGT-VSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRC 633
            S V +++  A+  E R GAS++R  FHDCFV+GCD  +LL+DT    GE+ + +N NS+R + VID+ K   +  C  T VSCAD++ +A+RDA       ++ + LGR+D+ TA+   A+  +P+P  N S     FA    + +++V L+G+H++G  RC
Sbjct:   74 SAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          

HSP 2 Score: 39.6614 bits (91), Expect = 4.628e-34
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 2
Query:  728 CPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLY 889
            CP   +    V LD +P  FD +YF++L  G+G L SD+ L     T   V+ Y
Sbjct:  256 CPASANDTGLVGLDPSPGTFDKKYFEELVKGQGLLFSDQELMQSNATVTAVRRY 309          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.052e-33
Identity = 80/183 (43.72%), Postives = 120/183 (65.57%), Query Frame = 1
Query:   94 ATADPLRPG----YYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLR--SYEVIDEVKEALEKACPGT-VSCADIIIMASRDAVALSGGPSWEVKLGRKDSLT-ASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSI 618
            A   PL PG    +Y  +CP+AESIV   +  A+ R+    A ++R  FHDCFV GCDAS+LLD + T  GE+ +  N+ +LR  +++ I+++ + L K C GT VSC+D++ +A+RD+V +SGGPS++V LGR+DS + A+Q+D    +P P A    L+ + +K +L   DLVALSG H+I
Sbjct:   32 ARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNL-TLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CK934660 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.374e-33
Identity = 79/202 (39.11%), Postives = 120/202 (59.41%), Query Frame = 1
Query:   64 ILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRS-YEVIDEVKEALEKA--CPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN 660
            IL   L I +++A  LR  +Y+ TCP  E IV + + K + +   +  + +R  FHDCFVNGCDAS+++  T T   EK    N++     ++ + + KEA++    C   VSCADI+ MA+RD V L+GGP + V+LGR+D L++S       +P P  + + L  LFA+  LS  D++ALSG+H++G   C  +  RLYN
Sbjct:   13 ILSLFLAINLSSAQ-LRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYN 213          
The following BLAST results are available for this feature:
BLAST of CK934660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER43_ARATH1.468e-3542.39Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER8_ARATH2.503e-3539.59Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER21_ARATH2.530e-3533.66Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER2_SOLLC9.473e-3541.57Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC1.234e-3442.77Suberization-associated anionic peroxidase 1 OS=So... [more]
PER46_ARATH2.731e-3438.42Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER71_ARATH3.615e-3440.72Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PERN_IPOBA4.628e-3438.89Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_SORBI1.052e-3343.72Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER51_ARATH1.374e-3339.11Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934660 ID=CK934660; Name=CK934660; organism=Citrus sinensis; type=EST; length=889bp
GGGGACCCACTTCATTCTGCTTATTTTGCTTATTTTGCAAAGCCCAAGAA
GATGTCGTTTTGGATACTATTCTTCCTTCTACTAATAACCATGGCAACTG
CAGACCCTCTCCGGCCTGGATACTACTCGGAGACCTGCCCGGAAGCAGAA
TCCATCGTCGGAGATGTGATTATGAAGGCCATGATTAGAGAACCAAGAAG
CGGAGCCTCTGTCATGCGGTTCCAGTTCCATGATTGCTTCGTTAATGGTT
GTGATGCTTCTATGTTGCTTGATGACACACCAACGATGCTTGGAGAAAAA
TTGTCTCTTTCGAACATTAATTCGCTGAGATCATACGAAGTCATCGATGA
GGTCAAAGAAGCATTAGAGAAAGCCTGTCCAGGAACCGTTTCTTGTGCTG
ATATCATTATCATGGCCTCAAGAGATGCCGTTGCGCTGAGTGGAGGGCCC
AGCTGGGAAGTGAAGCTGGGAAGAAAAGACAGCTTAACGGCCAGCCAAAA
GGATGCGGACGATATCATGCCAAGCCCTAGAGCCAATGCCAGTTTTCTGG
TTGACCTGTTTGCCAAATTTGATCTCTCCATCAAAGATCTTGTAGCCCTT
TCGGGCTCACACTCTATTGGCCAAGGCCGATGTTTTTCGATCATGTTTAG
GCTATACAATCAGTTCTGGGTCAGGCAAGCCTGACCCTGCCATCGAGNNN
AAGTTCAGAGAAAAGCTAAACAGGCTTTGTCCAATCGGCGGCGATGGGAA
TGTAACAGTAGACCTTGATGCAACACCTCAAGCTTTTGATAACCAATATT
TCAAGGACTTGGCTGCCGGTAGAGGATTTCTGAACTCTGATGAGACGCTG
TATACTTATCCGTGGACTAGACCATATGTGAAGCTTTAT
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