CK934661

Overview
NameCK934661
Unique NameCK934661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.108e-24
Identity = 66/206 (32.04%), Postives = 101/206 (49.03%), Query Frame = 2
Query:  338 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAI-------------CGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 916
            G+GL+G++ AFG  +  + Y    ISG H+NPAVT GL    +  + +   Y++AQ LGAI              G  L K F  + Y +   G       YN  +    E++ T + ++ +  +T  K  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    W+FWV P +G +     ++ +
Sbjct:   34 GIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASGAAGFDLAKGFASNGYGAHSPGQ------YNLVACFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAIGQLWLFWVAPLLGGVLGGVIYRVL 226          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.383e-23
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  338 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILE 922
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +LE
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.383e-23
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  338 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILE 922
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +LE
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.383e-23
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  338 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILE 922
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +LE
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.383e-23
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  338 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILE 922
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +LE
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.255e-23
Identity = 75/238 (31.51%), Postives = 114/238 (47.90%), Query Frame = 2
Query:  236 FYRALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILEGCCY 934
            F+R ++ E V T LF+++ V   +  G   +    GG  L  +A   G  + V V  TAG  ISGGH+NPAVT  L +   V+L R+  Y+ AQ L +     L++         L    + +A G      + AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NPARSFG AV       W  HW++WVGP  G   A   ++     CC+
Sbjct:   17 FFRGVLGELVLTFLFVFIGVGAAMTDGATTKGSTAGG-DLTAVA--LGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLT----GGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVA---SGVWTHHWVYWVGPLAGGPLAVLVYE-----CCF 234          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.864e-23
Identity = 79/235 (33.62%), Postives = 112/235 (47.66%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIG---HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKG----SALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGA-LAAAAYHQYIL 919
            RA++AE V T LF++  V+  +      K  DA     L  +A A      VLV     +SGGH+NPAVT GL +   ++ +RAV Y+ AQ L +     L++         L GG  T      +G      L  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARSFG A+   +   W +HW++W+GP +G  LA   Y    L
Sbjct:   24 RAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLR--------FLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGPLLGGPLAGFVYESLFL 242          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.964e-23
Identity = 64/208 (30.77%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  338 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAIC-------------GVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILE 922
            G+GL+G++ AFG  +  + Y    ISG H+NPAVT GL    +    + + Y++AQ  GAI              G  + K F  + Y++   G       Y+  +    E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    W+FWV P +G       ++++ E
Sbjct:   34 GIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGALGGVIYRWLSE 228          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.171e-22
Identity = 78/240 (32.50%), Postives = 118/240 (49.17%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHK-----KQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTV-----ASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 919
            RA  AEF +T LF++++V + I  +     + SDA   +    +A AFG  +F  V+  A +SGGH+NPAVTF   +   +++  A+ Y  +Q LG+        A +   Y S G    T       +G+  G   G   + TF++VYTV  A DP+       +      L  L +G       LA   +TG  +NPARSFG AV+  +   + +  ++W GP VGA  AA  HQ ++
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDA-SSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGS------TFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEG---VLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH---YSNQAVYWAGPMVGAAVAALVHQALV 242          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.997e-22
Identity = 67/228 (29.39%), Postives = 113/228 (49.56%), Query Frame = 2
Query:  239 YRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILE 922
            ++   +EF+ TL  +Y    +V      +       LLG     G  +  L++  +G+SG ++NPAVT    L+ +V LI ++ Y+ AQ LG I G G++   + + Y  +  G   +A G N G A   E++ T +L   V   +    +  D  +  +AP  IG A+F+        +G  +NP R  G ++I      W  HW++W+GP VGA+ AA  ++ +L+
Sbjct:   34 FKGFFSEFLGTLYLVYFCGGSVCAAFAVAGDSAARALLG-GLIQGMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMYR-IDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSII---SGVWSHHWVYWLGPIVGAILAAFIYRCLLQ 254          
The following BLAST results are available for this feature:
BLAST of CK934661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQPZ_RHOPA8.108e-2432.04Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
AQPZ_SHIFL1.383e-2333.33Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI1.383e-2333.33Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL61.383e-2333.33Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO571.383e-2333.33Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
TIP43_MAIZE5.255e-2331.51Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP41_MAIZE6.864e-2333.62Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
AQPZ_BRAJA8.964e-2330.77Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP51_ORYSJ1.171e-2232.50Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQPA_DICDI1.997e-2229.39Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934661 ID=CK934661; Name=CK934661; organism=Citrus sinensis; type=EST; length=934bp
GGGGACAGACGCTAGCTTTTCTCGAGACCAGAGAGGCTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACA
AACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCAC
CACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTC
ATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCAC
TGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTT
TGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGC
ACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCT
GTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGG
CTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATG
AAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGG
CTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGC
TTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGAC
TCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT
GGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTA
GGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGAC
CATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGC
ATACCACCAGTACATCTTGGAGGGCTGCTGCTAT
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