CK934661

Overview
NameCK934661
Unique NameCK934661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18
Identity = 68/225 (30.22%), Postives = 103/225 (45.78%), Query Frame = 2
Query:  233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYH 907
            S  R L AEFV T + ++ + A  I ++K     G +   G A   G  +  ++  T  ISG H+NP++T      R    ++  AY+  Q LG+IC  G     + H +  L GG        +   A   E I TF L++ V +     R+     V  LA + +G AV +  L   P TG  +NP R+ G AV   N   +   WI+ + P +GA+A A  +
Sbjct:   80 SLTRKLGAEFVGTFILIFFATAAPIVNQKYG---GAISPFGNAACAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSIC-AGFALKGVFHPF--LSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRA-----VGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGN---YRQLWIYLIAPTLGAVAGAGVY 290          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18
Identity = 72/229 (31.44%), Postives = 111/229 (48.47%), Query Frame = 2
Query:  248 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVT-----FGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 916
            LIAE + T   ++    +V  +K      G V   GI   +G ++ V+VY    ISG H NPAVT     FG F  ++V L     Y++AQ +G+I   G +         +  G   TV  G N G +L  EII +F+L++ +   ATD      D  +  +A + +G  + +      PI+G  +NPARS G A++ +    +   W++ VGP +G LA A  +  I
Sbjct:   45 LIAEAIGTYFVIFAGCGSVAVNK----IYGSVTFPGICVTWGLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPL-----YIIAQLMGSILASGTLALLFDVTPQAYFG---TVPVGSN-GQSLAIEIIISFLLMFVISGVATD------DRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKH---VYTGLWVYVVGPIIGTLAGAFVYNLI 251          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18
Identity = 66/225 (29.33%), Postives = 106/225 (47.11%), Query Frame = 2
Query:  236 FYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG----ANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 898
            F + L+AE + T   ++   A V  + +   A   V L GIA  +G  + VLVY    ISG H NPAVT       +  L +  AY+++Q +G+      ++     + +   G       T+ SG N  S +  E I TF L++ +       R+     +  LA L +G  V +  +   P++G  +NP RS G A++Y+    +   WI+ V P VGA++ A
Sbjct:   50 FLQKLMAEVLGTYFLIFAGCAAVAVNTQHDKA---VTLPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFV-IEFIITFYLMFVISGVATDNRA-----IGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYS---CYRGLWIYIVSPIVGAVSGA 262          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 62/223 (27.80%), Postives = 103/223 (46.19%), Query Frame = 2
Query:  248 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 916
            LIAE + T   ++     V+ +       G +   GI   +G ++ V++Y T  ISG H NPAVT    + R+    +   Y+ AQ  G++     ++        +  G   T +S    G AL AEII +F+L++ +       R+  +     LA + +G  + +      PI+G  +NPARS G A++    K     W++ VGPFVG  A    + ++
Sbjct:   45 LIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSS----GQALVAEIIISFLLMFVISGVATDSRATGE-----LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKG---IWVYIVGPFVGIFAGGFVYNFM 252          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 66/228 (28.95%), Postives = 106/228 (46.49%), Query Frame = 2
Query:  233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 916
            S  R L AEFV T + ++ + A  I ++K     G +   G A   G  +  ++  T  ISG H+NP++T      R    ++  AY+  Q L ++C    +K    H +  L GG     +  +   A   E I +F L++ V +     R+     V  LA + +G AV +  L   P TG  +NP R+ G AV   N   +   WI+ + P +GALA A+ ++ +
Sbjct:   71 SLTRKLGAEFVGTFILIFFATAAPIVNQKYG---GAISPFGNAACAGLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVF-HPF--LSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRA-----VGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGN---YRQLWIYLLAPTLGALAGASVYKAV 284          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.299e-17
Identity = 73/228 (32.02%), Postives = 117/228 (51.32%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVS--VATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 916
            + +++E V+T L ++V+   A + G  K       +  LG + A G ++ V++Y    ISG H+NPAVT    + R    I+   Y  AQ  G+IC   ++KA + H    LG    T  +G +  S L  EII TF +++ T+  ATD +       V  LA L +G AV +  +    ++G  +NPAR+ G A+  N    +   WI+++GP +G L+ A  + YI
Sbjct:   47 KKVVSEVVSTFLLVFVTCGAAGIYGSDKDR-----ISQLGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVL-HPIAVLG---TTTPTGPHWHS-LVIEIIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASN---LYTGLWIYFLGPVLGTLSGAWTYTYI 255          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.628e-17
Identity = 73/236 (30.93%), Postives = 117/236 (49.58%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGL----------LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 916
            + +++E VAT L ++++             CG  G+          LG + A G ++ V++Y    ISG H+NPAVT    + R    I+   Y  AQ  GAIC   ++KA + H  + +G    T   G +  S L  E+I TF +++ T+  ATD +       V  LA L +G AV +  +    I+G  +NPAR+ G A+  N    +D  WI+++GP +G L+ A  + +I
Sbjct:   49 KKVVSEVVATFLLVFMT-------------CGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVI-HPVDVIG---TTTPVGPHWHS-LVVEVIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNK---FDGLWIYFLGPVMGTLSGAWTYTFI 257          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.628e-17
Identity = 65/225 (28.89%), Postives = 100/225 (44.44%), Query Frame = 2
Query:  236 FYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM----KHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 898
            F + +IAE + T   ++   A V  +K+     G V   GI   +G  + V+VY    ISG H+NPAVT       +    R  AY  AQ  G+      ++A      +H + +   G++          +L  E I TF L++ V       R+     +  LA L +G  V +  L   PI+G  +NPAR+ G A+I      +   W++  GP  GA+A A
Sbjct:   52 FAQKVIAEILGTFFLIFAGCAAVAVNKRTG---GTVTFPGICITWGLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDV--------QSLAMEFIITFYLMFVVSGVATDNRA-----IGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGR---YTGIWVYIAGPVFGAVAGA 257          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 80/254 (31.50%), Postives = 107/254 (42.13%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN--TVASG----------YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSFG----AAVIYNNDKA-----WDDHWIFWVGPFVGALAAA-AYHQYILEGC 928
            R   AEF+ TL+ +   V   +       + G    L  AW FG M+ V  Y   GISGGHINPAVT  + + RK    +   Y+VAQ +GA  G  +   +         GG +  T A+G              +A   E IG  +LV  + +  D      DS+ P    +  L IGF V  + +A    T   INPAR  G    A++I     A     W   W  W GP  G +A A  Y  +I  GC
Sbjct:  348 REPFAEFLGTLVLVIFGVGGNLQATVTKGSGGSYESLSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGPIAGGIAGALIYDIFIFTGC 593          
BLAST of CK934661 vs. ExPASy Swiss-Prot
Match: PDUF_SALTY (Propanediol diffusion facilitator OS=Salmonella typhimurium GN=pduF PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.254e-16
Identity = 76/254 (29.92%), Postives = 114/254 (44.88%), Query Frame = 2
Query:  254 AEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-----KAFMKHE--YNSLGGGANTV----------ASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAAAYHQYIL 919
            AEF+ T LFL+  +   +   K + A  G+  + I W  G  I + VY TAGISGGH+NPAVT  L+L       + + Y++AQ  GA  G  L        F + E  ++ + G   ++          A+  N   A   E++ T +L+  + + TD            LAPL IG  V ++  +T P+TG  +NPAR FG  +       W   W               +  V P +GA A AA ++Y +
Sbjct:   11 AEFLGTGLFLFFGIGC-LSALKVAGASLGLWEICIIWGLG--ISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKG---PLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLF-----TWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFI 253          
The following BLAST results are available for this feature:
BLAST of CK934661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
NIP31_ORYSJ6.648e-1830.22Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]
NIP1_NICAL6.648e-1831.44Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
NIP12_ARATH6.648e-1829.33Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]
NIP42_ARATH8.683e-1827.80Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]
NIP31_MAIZE8.683e-1828.95Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]
NIP21_MAIZE3.299e-1732.02Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
NIP21_ORYSJ5.628e-1730.93Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NIP13_ORYSJ5.628e-1728.89Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica G... [more]
YFF4_YEAST7.350e-1731.50Uncharacterized membrane protein YFL054C OS=Saccha... [more]
PDUF_SALTY1.254e-1629.92Propanediol diffusion facilitator OS=Salmonella ty... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934661 ID=CK934661; Name=CK934661; organism=Citrus sinensis; type=EST; length=934bp
GGGGACAGACGCTAGCTTTTCTCGAGACCAGAGAGGCTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACA
AACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCAC
CACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTC
ATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCAC
TGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTT
TGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGC
ACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCT
GTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGG
CTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATG
AAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGG
CTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGC
TTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGAC
TCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT
GGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTA
GGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGAC
CATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGC
ATACCACCAGTACATCTTGGAGGGCTGCTGCTAT
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