CK934665
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934665 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 62/193 (32.12%), Postives = 78/193 (40.41%), Query Frame = 3 Query: 249 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA------------GGPLGEVTDPL--------YPGGS-FDPLGLA---------DDPEAFAELKVKEIXXGRLAMFSMFGFF 737 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + WF+AGA +P I S ++ Q++LMG VE R P + + YPGG FDPL LA D E LK+ EI RLAM +M F+ Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFY 241
BLAST of CK934665 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12 Identity = 62/193 (32.12%), Postives = 79/193 (40.93%), Query Frame = 3 Query: 249 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR--------------------IAGGPLGEVTDPLYPGGSF-DPLGLAD---------DPEAFAELKVKEIXXGRLAMFSMFGFF 737 P +L G PGD+G+D GL DP RE E+IH RWAML LG + A G+ WF+AGA +P + S + Q++LMG VE R A + YPGG F DPL LA D + LK+ EI RLAM +M F+ Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP-----WFEAGA------------DPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFY 246
BLAST of CK934665 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12 Identity = 79/243 (32.51%), Postives = 94/243 (38.68%), Query Frame = 3 Query: 165 TGSKSVSSGSPWYGPDRVKYLGPFSGEP----PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN----------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSFDPLGLA-DDPEAFAELKVKEIXXGRLAMFSMFGF 734 T + S+G+ G KY G P P +L G PGD G+D GLS E AKN RE E+IH RWAML LG + E A GV W +AG G Y G L SI + +V+L+G E YR T+P YPGG FDPL LA +D E LK EI RLAM S FG+ Sbjct: 28 TKKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVS-----WVEAGK--VELDGASYAG---LSLPFSITQLIWIEVILVGGAEFYR------NSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGY 252 The following BLAST results are available for this feature:
BLAST of CK934665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934665 ID=CK934665; Name=CK934665; organism=Citrus sinensis; type=EST; length=752bpback to top |