CK934669

Overview
NameCK934669
Unique NameCK934669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 33/98 (33.67%), Postives = 60/98 (61.22%), Query Frame = 1
Query:  151 EQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPY--VLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLA 438
            ++  K   + +++++DF A+WCGPCR I+P   + ++K     ++F KVDVD    ++ +  + AMPTF   K+G+ +D++VG+    L+  + K LA
Sbjct:    9 DEFNKLTNSGKIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANPTALESLVQKSLA 106          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 35/101 (34.65%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  148 NEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATASA 450
            N  L++S +  +L+++DF A+WCGPCR I+P   + + +     FLKV+ D  + +   + + AMPTF+FLK  + VD V G+ ++ + + I +H +   A
Sbjct:   13 NNILERS-DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQHYSPTPA 112          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: TRX3_YEAST (Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae GN=TRX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  187 VVVDFTASWCGPCRFIAPFLAELAKKLPYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 423
            +V+DF A+WCGPC+ + P L +L +  P V F+K DVDE   +A +  V AMPTF+  K+G+++ K++G+    L++ I
Sbjct:   46 LVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGI 124          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_CHLPN (Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1
Query:  184 LVVVDFTASWCGPCRFIAPFLAELAKKLPYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELQQTIAKH 432
            LV+VDF A WCGPCR + P L  LA +LP+V   K+++DE    A  + V ++PT +  K+G  V +VVG K KE L   I KH
Sbjct:   18 LVLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINIDENSKPAETYEVSSIPTLILFKDGNEVARVVGLKDKEFLTNLINKH 101          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14
Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 1
Query:  121 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQ 414
            +G   +++  E  +K  +    VVVDF A+WCGPC+ IAP L +L++    + F KVDVDEL  VA    V AMPTF F K G+  ++V G+    +Q
Sbjct:    1 MGVTPIKSVAEYKEKVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAIQ 98          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_BACSU (Thioredoxin OS=Bacillus subtilis GN=trxA PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 1
Query:  166 SNETKQ-LVVVDFTASWCGPCRFIAPFLAELAKKLPYVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELQQTIAKHL 435
            S ET + +V+ DF A WCGPC+ IAP L EL +++   L  +K+DVDE +  A  + V ++PT + LK+G++V+  VG K KE LQ+ + KHL
Sbjct:   12 SAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 QKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLA 438
            +K    K  VVVD  A+WCGPC+ IAP + + A+      F ++DVDEL  VA +  + AMPTF+  K+G+ V  VVG+    L+  I   LA
Sbjct:   18 EKVLNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTDASFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGALEAGIKALLA 110          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 36/89 (40.45%), Postives = 60/89 (67.42%), Query Frame = 1
Query:  175 TKQLVVVDFTASWCGPCRFIAPFLAELAKK-LPYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 435
            +++LV+VDF A WCGPCR I+P + ELA++ +  V  +K++ DE  S++ ++ + ++PT M  K+GK VD V+G+  K  L   + K+L
Sbjct:   19 SEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO1_SYNE7 (Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 1
Query:  160 QKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKL-PYVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 435
            Q+  E+   V+VDF A WCGPCR +AP + E+A++    V  +KV+ DE  SVA+ + + ++PT M  K+G+ VD VVG+  K  L  T+ KHL
Sbjct:   14 QEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVASQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107          
BLAST of CK934669 vs. ExPASy Swiss-Prot
Match: THIO_STAS1 (Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  190 VVDFTASWCGPCRFIAPFLAELAKKLP-YVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 435
            +VDF A+WCGPC+ IAP L ELA         LK+DVDE  S A  + V ++PT +  K+G+ VDKVVG   KE L + I KHL
Sbjct:   21 LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVIEKHL 104          
The following BLAST results are available for this feature:
BLAST of CK934669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
THIO_COPCM5.781e-1433.67Thioredoxin OS=Coprinus comatus PE=1 SV=1[more]
NGLY1_CAEEL5.781e-1434.65Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
TRX3_YEAST7.550e-1441.77Thioredoxin-3, mitochondrial OS=Saccharomyces cere... [more]
THIO_CHLPN7.550e-1446.43Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 S... [more]
THIO_PENCH9.860e-1441.84Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=... [more]
THIO_BACSU9.860e-1445.16Thioredoxin OS=Bacillus subtilis GN=trxA PE=1 SV=3[more]
THIO_EMENI1.682e-1341.94Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV... [more]
THIO_CYACA1.682e-1340.45Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV... [more]
THIO1_SYNE71.682e-1343.62Thioredoxin-1 OS=Synechococcus elongatus (strain P... [more]
THIO_STAS12.869e-1350.00Thioredoxin OS=Staphylococcus saprophyticus subsp.... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934669 ID=CK934669; Name=CK934669; organism=Citrus sinensis; type=EST; length=672bp
GGGATACGCAAATCACCAAGAGCAAGAAAGCGAGGGAGAGAATAGAAGTA
TCGTTGGGTGGAGTAGTGGTGGTAATAACCGCGGAAAGCAGAAATGGCAG
CAGCAGAAGAGGGACAAGTCATCGGGTGCCACACCGTTGAGGCCTGGAAC
GAGCAGCTCCAGAAGAGCAATGAAACCAAACAGCTGGTTGTTGTTGATTT
CACTGCTTCGTGGTGCGGACCATGCCGTTTCATTGCTCCTTTCTTGGCAG
AGCTGGCCAAGAAACTGCCTTATGTCCTGTTTCTGAAGGTTGATGTGGAT
GAACTGAAGAGTGTTGCCACTGACTGGGCAGTGGAGGCCATGCCAACTTT
CATGTTCCTGAAAGAGGGGAAGATTGTGGACAAGGTGGTTGGATCAAAGA
AAGAGGAACTGCAGCAGACTATTGCCAAGCATCTGGCAACTGCCTCTGCC
TAATAAGTTATAACTATCCTCCTGCCTTTTGGCTTTAGAGGCTATAGACC
TCAATATATGCTATCAGTCTGTAATTTACTTATTAGAGTGGTTATGGGAT
TGTGTTTGTTTGTGTGTTTGAATATTCCGTAATTTACTGTTCTATGAAGC
TCATACTGTGGTCTTTACAATAATTTAATTTCATATTTGGGGCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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