CK934686

Overview
NameCK934686
Unique NameCK934686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_SYNP6 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=acsF PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.336e-51
Identity = 98/162 (60.49%), Postives = 123/162 (75.93%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   KET+LTPRFYTTDF+ M      +++   N+ E  A+L+EF+ DYN+ HFVR  EF  +A  M    +++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F LM+RDEARHAGFLNK +SDF+  LDLGFLT  +KYT+FKP +IFYATYLS
Sbjct:   18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEFDGSAADMDPETKKVFVEFLEQSCTSEFSGFLLYKELSRRIKNRNPLLAECFELMARDEARHAGFLNKSMSDFDLQLDLGFLTANKKYTYFKPAYIFYATYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_SYNE7 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=acsF PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.336e-51
Identity = 98/162 (60.49%), Postives = 123/162 (75.93%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   KET+LTPRFYTTDF+ M      +++   N+ E  A+L+EF+ DYN+ HFVR  EF  +A  M    +++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F LM+RDEARHAGFLNK +SDF+  LDLGFLT  +KYT+FKP +IFYATYLS
Sbjct:   18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEFDGSAADMDPETKKVFVEFLEQSCTSEFSGFLLYKELSRRIKNRNPLLAECFELMARDEARHAGFLNKSMSDFDLQLDLGFLTANKKYTYFKPAYIFYATYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_PROM9 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9312) GN=acsF PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.888e-51
Identity = 97/162 (59.88%), Postives = 123/162 (75.93%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF  AA+K+    R++FV+FLE SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGFLT  + YT+F P+ IFYATYLS
Sbjct:   18 KIPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFDGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_PROM0 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9301) GN=acsF PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.888e-51
Identity = 96/162 (59.26%), Postives = 124/162 (76.54%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF+ AA+K+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGFLT  + YT+F P+ IFYATYLS
Sbjct:   18 KAPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_PROMP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=acsF PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.077e-51
Identity = 95/162 (58.64%), Postives = 125/162 (77.16%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF   LDLGFLT  + YT+F P+ IFYATY+S
Sbjct:   18 KDIAKDTILTPNFYTTDFEAME-----KMDLSINEDELEAICEEFRKDYNRHHFVRNKEFEGAADKIDAETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDFGLQLDLGFLTANKDYTYFAPRAIFYATYIS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_PROM5 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9515) GN=acsF PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.077e-51
Identity = 95/162 (58.64%), Postives = 125/162 (77.16%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF   LDLGFLT  + YT+F P+ IFYATY+S
Sbjct:   18 KDIAKDTILTPNFYTTDFEAME-----KMDLSINEEELEAICEEFRKDYNRHHFVRNKEFEGAADKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDFGLQLDLGFLTANKDYTYFAPRAIFYATYIS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_PROMS (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain AS9601) GN=acsF PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.631e-51
Identity = 96/162 (59.26%), Postives = 124/162 (76.54%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF+ AA+K+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGFLT  + YT+F P+ IFYATYLS
Sbjct:   18 KIPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKVKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_PROM2 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9215) GN=acsF PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.631e-51
Identity = 95/162 (58.64%), Postives = 125/162 (77.16%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF   LDLGFLT  + YT+F P+ IFYATY+S
Sbjct:   18 KEIAKDTILTPNFYTTDFEAME-----KMDLSINEDELEAICEEFRKDYNRHHFVRNKEFEGAADKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDFGLQLDLGFLTANKDYTYFPPRSIFYATYIS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF2_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Anabaena sp. (strain PCC 7120) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.639e-49
Identity = 91/162 (56.17%), Postives = 121/162 (74.69%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K  ++ETLLTPRFYTTDFD +  L     +   N+ E  A+++E + DYN+ HFVR++EFK++ D + G  R+ F++FLERSCT+EFSGFLL+KEL RR+K  NP++AE F  M+RDEARHAGFLNK +SD N +LDL +LTK R YTFF P+++ Y  YLS
Sbjct:   18 KAPVQETLLTPRFYTTDFDAVANL-----DISANETEIRAIVEELRADYNRHHFVRDEEFKQSWDHITGEKRRAFIDFLERSCTSEFSGFLLFKELSRRIKSRNPLLAEAFEFMARDEARHAGFLNKSMSDLNLSLDLNYLTKNRTYTFFPPEWVIYTVYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_GLOVI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Gloeobacter violaceus GN=acsF PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.059e-48
Identity = 95/158 (60.13%), Postives = 118/158 (74.68%), Query Frame = 3
Query:  246 KETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            +ETLLTPRFYTTDF+ +      +++    +A+FEALL EF+ DYN+ HF R+  F E A ++    R + +EFLERSCT+EFSGFLLYKE+ RRLK  NP++AE F  MSRDEARHAGFLNK + D++  LDL  L K +KYTFFKPKFIFYATYLS
Sbjct:   17 RETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQADYNREHFQRDAGFVEQAHQIDPQWRALMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKAMSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTFFKPKFIFYATYLS 169          
The following BLAST results are available for this feature:
BLAST of CK934686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF_SYNP61.336e-5160.49Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNE71.336e-5160.49Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM93.888e-5159.88Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM03.888e-5159.26Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROMP5.077e-5158.64Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM55.077e-5158.64Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROMS6.631e-5159.26Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM26.631e-5158.64Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_ANASP3.639e-4956.17Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_GLOVI1.059e-4860.13Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004227_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934686 ID=CK934686; Name=CK934686; organism=Citrus sinensis; type=EST; length=719bp
GGGGACTCAGTTACTCTCTAGTTCCTCTCCTGGTTCCAGAAATGGCAGCT
GAGATGGCACTGGTCAAACCGATTAGCAAATTCAGCACCATCGCCACCAC
TACTAAGCCTAGGTTCAGCTACCCGAAAGCAACATGTACATCTCTGAGCA
CAAGATTTTGTACAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTGCT
GCCACTGCCCAAAAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAGGA
GACCCTTCTGACACCAAGGTTTTATACAACAGATTTTGATGAAATGGAGA
CCCTTTTCAACACTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTGAG
GCATTGCTTCAAGAATTCAAGACTGATTATAACCAGACTCACTTTGTGAG
GAACAAGGAGTTCAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAGGC
AGATCTTTGTTGAGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTGGT
TTCCTTCTTTACAAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCAGT
GGTAGCTGAGATTTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGCCG
GGTTTCTGAACAAGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGC
TTCCTGACAAAAGCTAGGAAATACACATTTTTCAAGCCAAAGTTTATCTT
TTATGCCACATATTTATCT
back to top