CK934686

Overview
NameCK934686
Unique NameCK934686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF2_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Synechocystis sp. (strain PCC 6803) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.080e-48
Identity = 92/162 (56.79%), Postives = 118/162 (72.84%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K  +KETLLTPRFYTTDFD++  L  T     L   E EA L+E + DYN+ HFVRN +FK + D + G  R  F++FLERSCT+EFSGFLL+KEL RRLK  +P +AE F L++RDEARHAGF+NK ++DF  +LDL +LT+ R YTFF P+++ Y  YLS
Sbjct:   18 KAPVKETLLTPRFYTTDFDKVANLVLT-----LQDEEIEAALEELRADYNRYHFVRNDDFKRSFDHIDGATRLAFIDFLERSCTSEFSGFLLFKELSRRLKNRSPKLAEAFHLLARDEARHAGFINKAMADFGLSLDLRYLTQKRTYTFFPPEWVIYTVYLS 174          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF1_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Anabaena sp. (strain PCC 7120) GN=acsF1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.441e-45
Identity = 89/162 (54.94%), Postives = 120/162 (74.07%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            KT  KET+LTPRFYTTDF   ET  N +++ + N  E +A+L E + DYN+ HFVR++ F+++ + + G  RQ F+E+LERSC +EFSGFLL+KEL R+LK  +PV+AE+F LM+RDEARHAGFLNK + DF  +LDL  +TK R YTFF  +++ Y  YLS
Sbjct:   11 KTPSKETVLTPRFYTTDF---ETAANLDLSAQEN--ELQAMLAEMRADYNRHHFVRDEAFEQSWEHIDGEARQAFIEYLERSCISEFSGFLLFKELSRKLKNRSPVLAEMFQLMARDEARHAGFLNKAMGDFKLSLDLATVTKTRTYTFFPIEWVLYTVYLS 167          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF2_THEEB (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.211e-44
Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 3
Query:  243 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            I+E LLTPRFYTTDF++       +++    Q + EA+L E + DYN+ HFVR+  FK   D +    R+ F+++LERSC +EFSGFLL+KEL R+LK  NP++AEIF LM+RDEARHAGFLNK + DF +A+DLG+L+K R YTFF   ++ Y  YLS
Sbjct:   17 IRENLLTPRFYTTDFEQA-----AKLDLSRQQEQLEAMLAEMRADYNRHHFVRDDSFKGTWDLLDAQTRKAFIDYLERSCVSEFSGFLLFKELSRKLKDRNPLLAEIFHLMARDEARHAGFLNKAMMDFGHAMDLGYLSKTRTYTFFPLPWVLYTVYLS 170          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_BRASB (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=acsF PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.349e-42
Identity = 87/162 (53.70%), Postives = 117/162 (72.22%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K A+++T+LTPRFYTTDF  M+ L     N  L + E++A++ E + D+N+ HFVR  EF++  +++   LR  F +FL  S TAEFSG +LY E+ +R+  TNP + E+FS MSRDEARHAGF+N+ L D    +DLGFLTK +KYT+FKPKFIFYATYLS
Sbjct:   14 KMALEDTILTPRFYTTDFAAMDRL-----NVDLVRREWDAVMAELRADHNRKHFVRTPEFEKDLNELPEALRLEFKDFLVSSLTAEFSGCVLYAEIKKRI--TNPDIRELFSYMSRDEARHAGFINEILKDHGIGVDLGFLTKVKKYTYFKPKFIFYATYLS 168          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_BRASO (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Bradyrhizobium sp. (strain ORS278) GN=acsF PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.138e-41
Identity = 86/162 (53.09%), Postives = 115/162 (70.99%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            K A+++T+LTPRFYTTDF  M+ L     N  L + E++A++ E + D+N+ HFVR  EF +  +++   LR  F +FL  S TAEFSG +LY E+ +R+  TNP + E+F  MSRDEARHAGF+N+ L D    +DLGFLTK +KYT+FKPKFIFYATYLS
Sbjct:   14 KMALEDTILTPRFYTTDFAAMDRL-----NVDLVRREWDAVMAELRADHNRKHFVRTPEFDKDLNELPEALRAEFKDFLVSSLTAEFSGCVLYAEIKKRI--TNPDIRELFQFMSRDEARHAGFINEILKDHGIGVDLGFLTKTKKYTYFKPKFIFYATYLS 168          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_RHOP2 (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris (strain HaA2) GN=acsF PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.614e-39
Identity = 83/161 (51.55%), Postives = 114/161 (70.81%), Query Frame = 3
Query:  240 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            A ++T+LTPRFYTTD+  M+ L     +  L ++E+  ++ E + DYN++HF +N EF E+  DK+   LR  F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL FLTK +KYT+F+PKFIFYATYLS
Sbjct:   28 AKEDTILTPRFYTTDYAAMDKL-----DVSLVRSEWNVMMNEMRADYNKSHFKKNDEFLESDLDKLPPALRAEFKDFLVSSLTAEFSGCVLYAEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTYFRPKFIFYATYLS 181          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_RHOPT (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris (strain TIE-1) GN=acsF PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39
Identity = 83/161 (51.55%), Postives = 113/161 (70.19%), Query Frame = 3
Query:  240 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            A ++T+LTPRFYTTD+  M+ L     +  L +AE+ A++ E + DYN++HF +  EF  +  DK+   LR  F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL FLTK +KYT+F+PKFIFYATYLS
Sbjct:   28 AKQDTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHFKKTDEFLNSDLDKLPPELRAEFKDFLVSSLTAEFSGCVLYAEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTYFRPKFIFYATYLS 181          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_RHOPA (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris GN=acsF PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39
Identity = 83/161 (51.55%), Postives = 113/161 (70.19%), Query Frame = 3
Query:  240 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            A ++T+LTPRFYTTD+  M+ L     +  L +AE+ A++ E + DYN++HF +  EF  +  DK+   LR  F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL FLTK +KYT+F+PKFIFYATYLS
Sbjct:   28 AKQDTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHFKKTDEFVNSDLDKLPPELRAEFKDFLVSSLTAEFSGCVLYAEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTYFRPKFIFYATYLS 181          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_RHOPS (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris (strain BisB5) GN=acsF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.929e-38
Identity = 82/161 (50.93%), Postives = 112/161 (69.57%), Query Frame = 3
Query:  240 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            A ++T+LTPRFYTTD+  M+ L     +  L ++E+ A++ E + DYN+ HF +  EF E+  DK+   L   F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL FLTK +KYT+F+PKFIFYATYLS
Sbjct:   30 AKEDTILTPRFYTTDYAAMDKL-----DVSLVRSEWNAMMNEMRADYNKAHFKKTDEFLESDLDKLPPELLIEFKDFLVSSLTAEFSGCVLYSEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTYFRPKFIFYATYLS 183          
BLAST of CK934686 vs. ExPASy Swiss-Prot
Match: ACSF_RHOGE (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodocyclus gelatinosus GN=acsF PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.536e-31
Identity = 74/166 (44.58%), Postives = 110/166 (66.27%), Query Frame = 3
Query:  234 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEF-KEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLS 719
            + A + TLL+PRFYTTD+  M  +  + I     +AE++A+L E++ D N  HF R  EF +E A++   +   LRQ F++FL  S T+EFSG +LY E+ + ++  NP V  +   M+R+E+RHAGF+N+ L DF   ++LG L + + YT+FKPK+IFYATYLS
Sbjct:   15 RRAKESTLLSPRFYTTDYAAMNAIDVSSI-----RAEWDAMLAEYEGDNNHDHFQRTPEFAQEVAERFSQVSPELRQEFLDFLVSSVTSEFSGCVLYNEIQKNVE--NPDVKALMRYMARNESRHAGFINQALRDFGLGINLGGLKRTKAYTYFKPKYIFYATYLS 173          
The following BLAST results are available for this feature:
BLAST of CK934686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF2_SYNY33.080e-4856.79Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF1_ANASP2.441e-4554.94Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_THEEB1.211e-4453.46Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_BRASB7.349e-4253.70Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_BRASO2.138e-4153.09Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOP22.614e-3951.55Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOPT9.932e-3951.55Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOPA9.932e-3951.55Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOPS4.929e-3850.93Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOGE1.536e-3144.58Aerobic magnesium-protoporphyrin IX monomethyl est... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934686 ID=CK934686; Name=CK934686; organism=Citrus sinensis; type=EST; length=719bp
GGGGACTCAGTTACTCTCTAGTTCCTCTCCTGGTTCCAGAAATGGCAGCT
GAGATGGCACTGGTCAAACCGATTAGCAAATTCAGCACCATCGCCACCAC
TACTAAGCCTAGGTTCAGCTACCCGAAAGCAACATGTACATCTCTGAGCA
CAAGATTTTGTACAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTGCT
GCCACTGCCCAAAAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAGGA
GACCCTTCTGACACCAAGGTTTTATACAACAGATTTTGATGAAATGGAGA
CCCTTTTCAACACTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTGAG
GCATTGCTTCAAGAATTCAAGACTGATTATAACCAGACTCACTTTGTGAG
GAACAAGGAGTTCAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAGGC
AGATCTTTGTTGAGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTGGT
TTCCTTCTTTACAAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCAGT
GGTAGCTGAGATTTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGCCG
GGTTTCTGAACAAGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGC
TTCCTGACAAAAGCTAGGAAATACACATTTTTCAAGCCAAAGTTTATCTT
TTATGCCACATATTTATCT
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