CK934699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26 Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 3 Query: 609 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GVL YGPPG GKT+LA+AVA+ T A FIRV+GSE V Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 552 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 ++ G V + + + LPP+ D S+ M+ +EKPD++Y D+GG Q +++RE VELP+ H E + ++GIDPP+GVL YGPPG GKT+LA+AVA T A FIRV+GSE V Sbjct: 120 LKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFV 232
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26 Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 3 Query: 609 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GVL YGPPG GKT+LA+AVA+ T A FIRV+GSE V Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26 Identity = 57/113 (50.44%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 552 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 +E G RV ++ + + +Q L + D M V+E P VTY D+GG +Q+ ++RE VE P+++PEKF +G++PP GVL +GPPGTGKT+LA+AVAN+TDA FI++ GSELV Sbjct: 112 LEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELV 223
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26 Identity = 64/155 (41.29%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PL + + + I+ N+ ++ + +VV + + ++ V + R+ + LPP+ D S+ M+ EKPDVTY DVGG Q +++RE VELP+ + + ++GIDPP+GVL YGPPGTGKT+L +AVAN T A FIRV GSE V Sbjct: 87 PLVIGQFMEAIDQNTG----IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFV 237
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26 Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 516 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 V+GL D K+ P D+ VGV+++ Y I LP D V M V+E+P Y+D+GG +QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F+++ G +LV Sbjct: 139 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 260
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.774e-26 Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PL + + + I+ N+ ++ + +VV + + ++ V + R+ + LPP+ D S++M+ +E+PDV+Y DVGG Q +++RE VELP+ + + ++GIDPP+GVL YGPPGTGKT+L +AVAN T A FIRV+GSE V Sbjct: 55 PLVIGQFLEAIDQNTA----IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFV 205
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.774e-26 Identity = 55/94 (58.51%), Postives = 72/94 (76.60%), Query Frame = 3 Query: 609 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 LPP D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GVL YGPPG GKT+LA+AVA+ T A FIRV+GSE V Sbjct: 143 LPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26 Identity = 55/107 (51.40%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 570 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 V + R+ + LPP+ D S+ ++ +EKP +Y+D+GG Q ++MRE VELP+ H + ++GIDPP+GVL YGPPGTGKT+LA+AVA+ T A FIRV+GSE V Sbjct: 115 VALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFV 221
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.348e-25 Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 P+ V +II D + I ++ V + V +E G V + I L DP + +M +++ P +Y D+GG + QI++++E VELP+ HPE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+RV+GSEL+ Sbjct: 113 PMSVGTLEEII-----DDDHAIVSTAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELI 262 The following BLAST results are available for this feature:
BLAST of CK934699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934699 ID=CK934699; Name=CK934699; organism=Citrus sinensis; type=EST; length=890bpback to top |