CK934699

Overview
NameCK934699
Unique NameCK934699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  642 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            M  +++  VT+ DV GC E  E++ E+V+  +  P KF  LG   PKG+L  GPPGTGKTLLARA+A      F  + GS+ V
Sbjct:  140 MLNQDQIKVTFADVAGCDEAKEEVGEIVDF-LRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFV 221          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 31/62 (50.00%), Postives = 49/62 (79.03%), Query Frame = 3
Query:  657 KPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 842
            + ++ +N +GG ++ I +++E+V LP+L+PE F+ L I PP+GVL +GPPGTGKTL+AR +A
Sbjct:  366 RENLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLA 427          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  648 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 887
            VE KP V +  +GG ++   K+R+ +E PM +PE F ++G+ PPKGVL YGPPG  KT L +AVA      F  +  ++L
Sbjct:  449 VEFKP-VHWEHIGGLEDIKHKLRQSIEWPMKYPEAFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCHCSFFSISAADL 527          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PEX6_CANGA (Peroxisomal biogenesis factor 6 OS=Candida glabrata GN=PEX6 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  660 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            P+VT++DVGG     + + E ++LP+ HPE F   G+    G+L YGPPGTGKTLLA+A+A      F  V G EL+
Sbjct:  713 PNVTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELL 788          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: NVL_HUMAN (Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 3
Query:  516 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            ++GL     P   E+   + ++ N + + +     + PS         P+VT+ D+G  ++  E++   +  P+ +P++F  LG+  P GVL  GPPG GKTLLA+AVAN +   FI V G EL+
Sbjct:  531 LLGLLRDQDPLSEEQMQGLCIELNDFIVALS---SVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELL 652          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 3
Query:  651 EEKPD--VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            E +PD  V++ D+ G  E   +  E+V   +  P+K+  +G   PKG+L  GPPGTGKTLLA+A+AN  D  F  V GSE V
Sbjct:  176 ERRPDTGVSFKDIAGIDEAKTEFEEIVSF-LKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFV 256          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  654 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            EKP V +ND+ G +E  E++ E+V+  + +P+++  LG   PKGVL  GPPGTGKTLLA+AVA      F  + GS  +
Sbjct:  169 EKPKVRFNDMAGNEEAKEEVVEIVDF-LKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFI 246          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 3
Query:  630 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            S   M  E+K    + DV G  E+ +++ EVVE  +  P KF  +G   PKGVL  GPPGTGKTLLARAVA      F  + GS+ V
Sbjct:  151 SKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEF-LKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFV 236          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  651 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            ++ P +T+ DV G  E  E++ E+V+  +  P KF KLG   PKG L  GPPGTGKTLLA+A+A   +  F  + GS+ V
Sbjct:  147 DKGPKITFKDVAGIDEAKEELTEIVDF-LRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFV 225          
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  651 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890
            ++ P +T+ DV G  E  E++ E+V+  +  P KF KLG   PKG L  GPPGTGKTLLA+A+A   +  F  + GS+ V
Sbjct:  147 DKGPKITFKDVAGIDEAKEELTEIVDF-LRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFV 225          
The following BLAST results are available for this feature:
BLAST of CK934699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
FTSH1_HAEIN2.978e-1245.78Cell division protease ftsH homolog 1 OS=Haemophil... [more]
YHI5_SCHPO3.889e-1250.00Uncharacterized AAA domain-containing protein P22H... [more]
SPA5L_XENTR3.889e-1243.75Spermatogenesis-associated protein 5-like protein ... [more]
PEX6_CANGA3.889e-1246.75Peroxisomal biogenesis factor 6 OS=Candida glabrat... [more]
NVL_HUMAN3.889e-1233.60Nuclear valosin-containing protein-like OS=Homo sa... [more]
FTSH_ODOSI3.889e-1245.12Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_HELFE3.889e-1245.57Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_BACPF3.889e-1245.98Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_RICTY5.079e-1245.00Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICPR5.079e-1245.00Cell division protease ftsH homolog OS=Rickettsia ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_H06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934699 ID=CK934699; Name=CK934699; organism=Citrus sinensis; type=EST; length=890bp
GGGGGACCCGATAAAGAAACTCGTCATCATAGATCGGATCCTACCACCTT
AAGGAAACTCGTGCGGTCGTGCCTCTCTTTCAAGCCAAACGCCTCGACGA
CACCGTTTCCTCAGAAAGACCTCGCCGACGGTTTTCAACGCCCAATCTTC
CTCTCTAGGAAATTCATAAAACAATGGCACCCGAGCCAGAAGATGAGATC
AAGGATGAGAAGAATCCCAGACCCCTTGATGAAGATGACATTGCGCTGCT
TAAAACATATGGTTTAGGACCGTATTCTACTAGCATAAAGAAAGCAGAGA
AGGAGATTAAGGACATGGCCAAGAAAGTCAACGACTTGTGTGGTATCAAG
GAATCTGACACAGGCTTAGCTGCACCCAGCCAGTGGGATCTTGTATCCGA
TAAGCAGATGATGCAAGAGGAGCAGCCTCTTCAGGTTGCGAGATGCACCA
AGATTATCAATCCAAATTCTGAAGATTCTAAATATGTAATAAATGTTAAG
CAAATTGCCAAGTTTGTTGTTGGGCTTGGTGACAAAGTTTCCCCTACTGA
TATTGAAGAAGGGATGCGTGTGGGGGTTGACCGGAATAAATATCAAATTC
AAATTCCCTTGCCTCCAAAAATTGATCCAAGTGTAACCATGATGACTGTG
GAAGAGAAACCAGATGTGACATATAATGATGTTGGTGGATGTAAGGAGCA
GATTGAAAAGATGCGAGAAGTTGTTGAGCTACCTATGCTTCATCCTGAGA
AGTTCGTAAAGCTTGGAATTGATCCTCCTAAGGGTGTTCTATGCTATGGT
CCTCCAGGGACTGGTAAAACGCTTCTAGCCAGAGCTGTGGCTAATAGAAC
TGATGCTTGTTTCATTCGTGTCATTGGAAGTGAACTTGTT
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