CK934699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PEX6_HUMAN (Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 660 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 P V+++DVGG +E +++ E ++LP+ HPE + LG+ G+L +GPPGTGKTLLA+AVA F+ V G EL+ Sbjct: 700 PSVSWHDVGGLQEVKKEILETIQLPLEHPE-LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELI 774
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 651 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 +E V ++DV G +E+ +++ EVVE + P++F KLG P GVL GPPGTGKTLLA+AVA F + GS+ V Sbjct: 179 KEDIKVRFSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFV 257
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 651 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 +E V ++DV G +E+ +++ EVVE + P++F KLG P GVL GPPGTGKTLLA+AVA F + GS+ V Sbjct: 179 KEDIKVRFSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFV 257
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 633 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 VT M K V + DV GC E +++ E V + +P+K+ +LG PKG L GPPGTGKTLLA+A A + F+ + GS+ + Sbjct: 321 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFM 405
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 618 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 K+ ++T + EKP+V ++D+ G + E ++E V LP+ P+ F G P G+L YGPPGTGK+ LA+AVA + F + S+LV Sbjct: 110 KLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLV 199
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 630 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 S + +E + VT+ DV G ++ ++ EVV+ + + ++F +LG PKGVL GPPGTGKTLLA+AVA F + GSE V Sbjct: 146 SKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDF-LKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFV 231
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PEX6_RAT (Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 660 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 P V+++DVGG ++ +++ E ++LP+ HPE + LG+ G+L +GPPGTGKTLLA+AVA F+ V G EL+ Sbjct: 698 PSVSWHDVGGLQDVKKEILETIQLPLEHPE-LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELI 772
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 660 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 P V+++DVGG ++ +++ E ++LP+ HPE + LG+ G+L +GPPGTGKTLLA+AVA F+ V G EL+ Sbjct: 701 PSVSWHDVGGLQDVKKEILETIQLPLEHPE-LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELI 775
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PEX6_DEBHA (Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii GN=PEX6 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 660 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PDV + D+GG +++ + +++P+ HPE F G+ G+L YGPPGTGKTLLA+A+A F V G EL+ Sbjct: 834 PDVKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELL 909
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 3 Query: 651 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 E K + DV G E E++ EVV+ + P+K+ ++G P+GVL GPPGTGKTLLARAVA F R+ GS+ + Sbjct: 133 EGKVTTRFADVAGVDEAKEELMEVVDF-LKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFI 211 The following BLAST results are available for this feature:
BLAST of CK934699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934699 ID=CK934699; Name=CK934699; organism=Citrus sinensis; type=EST; length=890bpback to top |