CK934779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.234e-15 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 331 GKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 G GT +EGGYF + + DYP +PPK F +HPNV +G +CL IL + W P T+K L+ +Q LL P P++P Q+++Q+ ++ R R+ Y Sbjct: 42 GPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ--WSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSY 149
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.234e-15 Identity = 56/150 (37.33%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 217 RLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 666 RL E G A PE N+ W+ I G T +EG + L+L FS DYP K PK KF FHPNV G +CL IL + W A V+ IL+ IQ LL +PN + P QL+ + EY++ V K Y P+ Sbjct: 40 RLQSELMGLMMGADPGISAFPEED----NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRKMVE---KLYKPL 179
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 262 GFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 G A+P+ N + +I G + +EGG F L L+ E+YP PK +F +HPNV SG +CL IL + W PA+ ++ +L+ IQ LL PNP DP D + + + A+ R + Y Sbjct: 22 GIKAEPDES----NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLY 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 1 Query: 217 RLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAK 651 RL +E + + G A P DG NL W + G T +E + LTL F DYP KPP KF +HPNV SG +CL IL E+ W + V+ IL+ +Q LL +PN A P ++ + EYK+ + ++ K Sbjct: 34 RLQQELRTLLMSGDPGITAFP---DGD-NLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKEN--WTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYK 171
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 301 NLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQD-PAEYKRRV 636 +L WE +I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA D + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 301 NLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQD-PAEYKRRV 636 +L WE +I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA D + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 301 NLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQD-PAEYKRRV 636 +L WE +I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA D + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 301 NLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQD-PAEYKRRV 636 +L WE +I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA D + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15 Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 301 NLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRV 636 N+ W I G T +EGG+F + F ++YP+ PP +F +HPNVYP G VC+SIL+ W P TV+ I++ I +L PN PA + + + + E+K++V Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKV 155
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.690e-15 Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 325 IPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVR 639 I G TGT +EGG F + L +D+P+ PPK F FHPNV +G +C++ L +D W+P + +KQ+L+ ++ LL PNP + +L ++ +Y +R + Sbjct: 50 IEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKD--WKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAK 152 The following BLAST results are available for this feature:
BLAST of CK934779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934779 ID=CK934779; Name=CK934779; organism=Citrus sinensis; type=EST; length=866bpback to top |