CK934779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G P N+ +W +I G T W+GG F LTL F+EDYP+KPP +F FHPN+Y G++CL IL N W P V IL IQ LL PNP PA ++ +++ ++ EY R+VR+ +Q Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHDN----NITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 A+ RL + K +K+ P G P+ N+M W +I G T W+GG F LTL+F+EDYP+KPP +F FHPN+Y G++CL IL N W P V +L IQ LL PNP PA + +LF ++ EY R+V + +Q Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDN----NIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26 Identity = 65/149 (43.62%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 +R RL + K +++ P G P T+D N++ WE II G T +E G F L+L F+E+YP+KPP KF FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++RV+Q +Q Sbjct: 5 SRRRLMRDFKKLQEDPPAGVSGAP-TED---NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++RV +Q Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++RV +Q Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++RV +Q Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++RV +Q Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++RV +Q Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQ 147
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 217 RLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSIL-----------NEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 RL +E K +N P G A P +D + W+C+I G GT +EGG +P TL F DYP PP KF FFHPNVY GTVC+SIL + W P +V++IL+ + +L +PN A D +++ +D EY R VR+ A++ Sbjct: 9 RLMKEYKELTENGPDGITAGPSNED---DFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 61/149 (40.94%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 208 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 654 AR RL + K +++ P G A P N+M+W +I G T +E G F L L F EDYP+KPP KF FHPNVY +G +CL IL N W P V IL IQ L + PNPA PA + LF ++Y +RV++ ++ Sbjct: 5 ARRRLMRDFKRMKEDSPPGVSASPLPD----NVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDIL--QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEK 147 The following BLAST results are available for this feature:
BLAST of CK934779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934779 ID=CK934779; Name=CK934779; organism=Citrus sinensis; type=EST; length=866bpback to top |