CK934779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.099e-19 Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 313 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 W+ I G + ++GG F LT+ F +YP KPPK +F +HPNV +G++CL IL W PA+T+ ++L+ I LL PNP DP + Q++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQ--WSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 217 RLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 R+ +E ++ P A P D L W+ I G + + + GG F L+++F DYP KPPK F +HPN+ SG +CL IL + W PA+T+ ++L+ I LL NP DP + Q++ D A+Y+ ++ K+Y Sbjct: 6 RIAKELSDLGRDPPASCSAGPVGDD----LYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQ--WSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKEWTKKY 146
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 301 NLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 +L W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP + + D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 313 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 313 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 313 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 313 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 313 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.992e-19 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 217 RLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 657 R+ E K+ P A P D L W+ I G + + GG F L+++F DYP KPPK F +HPN+ +G++CL IL + W PA+T+ ++L+ I LL PNP DP + ++ D + Y+ R+ ++Y Sbjct: 5 RINRELADLGKDPPSSCSAGPVGDD----LFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKY 145
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.992e-19 Identity = 53/153 (34.64%), Postives = 75/153 (49.02%), Query Frame = 1 Query: 217 RLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG-----------WRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQ 642 RL E K N P G VA P ++ N WE +I G T +E G FP L F DYP PPK +F FHPN+YP G VC+SIL+ W P +V++IL+ + +L +PN A D +++ D ++ + +Q Sbjct: 8 RLMAEYKQLTLNPPEGIVAGPMNEE---NFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157 The following BLAST results are available for this feature:
BLAST of CK934779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934779 ID=CK934779; Name=CK934779; organism=Citrus sinensis; type=EST; length=866bpback to top |