CK934785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.283e-95 Identity = 170/276 (61.59%), Postives = 212/276 (76.81%), Query Frame = 2 Query: 77 ASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQEL-EQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEV-TSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 +S G G + L+ ELW ACAGPL +P +RV+YF QGH+EQL+ L +Q+ F +P KILCKVVNV+ +AE ETDEV+AQITL P+PDQ + T PDPP+PE + VHSFCK LT SDTSTHGGFSVL RHA++CLPPLDMS P QEL+ DLHG+EW F+HI+R QPRRHLLT GWS FV+SKKL++GDAF++LR E E RVGVRR +++Q+ MP+SVISS SMHLGVLA ASHAI T ++F ++Y+PR S+S++IVSVNK Sbjct: 2 SSQGAGGGVGDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNK 277
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 4.876e-95 Identity = 176/263 (66.92%), Postives = 204/263 (77.57%), Query Frame = 2 Query: 116 LYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQ-ELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQ-SEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 LY ELW CAGPL +P +RVYYFPQGHMEQLEAS Q +L P F LP KILC V+NV +AE +TDEVYAQITL+P + E SPDP PE ++ VHSF K LTASDTSTHGGFSVL +HA +CLPPLDM++Q P QELVA D+HG +W F+HIFR QPRRHLLT GWS FV+SK+LVAGD F+FLRGEN ELRVGVRR QQ++MPSSVISSHSMHLGVLA A HA T T+F ++YKPRT S+FI+S+NK Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRT--SQFIISLNK 269
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSJ (Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17 PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.270e-84 Identity = 159/288 (55.21%), Postives = 205/288 (71.18%), Query Frame = 2 Query: 44 SFAAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPP--IPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 S + + +P AS P L ELWHACAGPL +LP G RV YFPQGH EQ+ AS ++E+E Q+P++ NLP +++C++ NV A+ ETDEVYAQ+TL P Q E+ P P + K + FCKTLTASDTSTHGGFSV R A+ PPLD ++QPP QEL+A DLHGNEW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ +N +L +G+RR R QT MPSSV+SS SMH+G+LA A+HA +T + F+IFY PR S SEF++ ++K Sbjct: 5 SSSGSVLPAQAAS--PEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQ-ELKDPYLPAELGSANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSK 289
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17 PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.270e-84 Identity = 159/288 (55.21%), Postives = 205/288 (71.18%), Query Frame = 2 Query: 44 SFAAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPP--IPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 S + + +P AS P L ELWHACAGPL +LP G RV YFPQGH EQ+ AS ++E+E Q+P++ NLP +++C++ NV A+ ETDEVYAQ+TL P Q E+ P P + K + FCKTLTASDTSTHGGFSV R A+ PPLD ++QPP QEL+A DLHGNEW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ +N +L +G+RR R QT MPSSV+SS SMH+G+LA A+HA +T + F+IFY PR S SEF++ ++K Sbjct: 5 SSSGSVLPAQAAS--PEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQ-ELKDPYLPAELGSANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSK 289
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFY_ORYSJ (Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 1.127e-83 Identity = 154/272 (56.62%), Postives = 196/272 (72.06%), Query Frame = 2 Query: 89 PPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 P G L ELWHACAGPL +LP RV YFPQGH EQ+ AS ++E++ Q+P++ NLP +++C++ NV A+ ETDEVYAQ+TL P P++ + + K + FCKTLTASDTSTHGGFSV R A+ PPLD S+QPP QEL+A DLH NEW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ IF+ +N +L +G+RR RQQT MPSSV+SS SMH+G+LA A+HA AT + F+IFY PR S SEF++ + K Sbjct: 16 PENDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAK 287
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSJ (Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6 PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.591e-83 Identity = 154/273 (56.41%), Postives = 197/273 (72.16%), Query Frame = 2 Query: 89 PPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPP--IPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 P L ELWHACAGPL +LP G RV YFPQGH EQ+ AS ++E+E Q+P++ NLP +++C++ NV A+ ETDEVYAQ+TL P Q E+ P P + K + FCKTLTASDTSTHGGFSV R A+ PPLD ++QPP QEL+A DLHGNEW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ ++ +L +G+RR R QT MPSSV+SS SMH+G+LA A+HA +T + F+IFY PR S SEF++ + K Sbjct: 18 PEVAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQ-ELKDPFLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAK 289
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSI (Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.591e-83 Identity = 154/273 (56.41%), Postives = 197/273 (72.16%), Query Frame = 2 Query: 89 PPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPP--IPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 P L ELWHACAGPL +LP G RV YFPQGH EQ+ AS ++E+E Q+P++ NLP +++C++ NV A+ ETDEVYAQ+TL P Q E+ P P + K + FCKTLTASDTSTHGGFSV R A+ PPLD ++QPP QEL+A DLHGNEW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ ++ +L +G+RR R QT MPSSV+SS SMH+G+LA A+HA +T + F+IFY PR S SEF++ + K Sbjct: 18 PEVAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQ-ELKDPFLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAK 289
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFF_ARATH (Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 1.989e-80 Identity = 152/271 (56.09%), Postives = 194/271 (71.59%), Query Frame = 2 Query: 101 GSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPE----PEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 G L ELWHACAGPL +LP G RV YFPQGH EQ+ AS ++E++ +P++ +L +++C++ NV A+ ETDEVYAQ+TL P Q + DP +P P + + FCKTLTASDTSTHGGFSV R A+ PPLD S+QPP QEL+A DLH NEW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ + +L +G+RR R QT MPSSV+SS SMHLG+LA A+HA AT + F+IFY PR S SEF++ + K Sbjct: 17 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQ---KDPYLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAK 284
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 3.392e-80 Identity = 146/263 (55.51%), Postives = 194/263 (73.76%), Query Frame = 2 Query: 116 LYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 L ELWHACAGPL +LP G RV YFPQGH EQ+ A+ ++E++ +P++ +LP +++C++ NV A+ ETDEVYAQ+TL P P++ + T + P K + FCKTLTASDTSTHGGFSV R A+ PPLD + QPP QEL+A DLH EW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ IF+R E +L +G+R R QT +PSSV+SS SMH+G+LA A+HA AT + F++F+ PR S+SEF++ ++K Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSK 281
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSJ (Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12 PE=2 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 1.684e-79 Identity = 152/287 (52.96%), Postives = 196/287 (68.29%), Query Frame = 2 Query: 44 SFAAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 S AA+ P P L ELWHACAGPL LP G RV YFPQGH EQ+ AS ++E+E +P++ NLP++++C++ +V A+ ETDEVYAQ+TL P P + + K + FCKTLTASDTSTHGGFSV R A+ PPLD ++QPP QEL+A D+H EW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ E +L +G+RR R QT MPSSV+SS SMH+G+LA A+HA AT + F+IFY PR S SEF++ ++K Sbjct: 4 SSAASIGPPQPPPPPAPPEEEKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSK 290 The following BLAST results are available for this feature:
BLAST of CK934785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934785 ID=CK934785; Name=CK934785; organism=Citrus sinensis; type=EST; length=900bpback to top |