CK934785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSI (Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=2 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 1.684e-79 Identity = 152/287 (52.96%), Postives = 196/287 (68.29%), Query Frame = 2 Query: 44 SFAAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 S AA+ P P L ELWHACAGPL LP G RV YFPQGH EQ+ AS ++E+E +P++ NLP++++C++ +V A+ ETDEVYAQ+TL P P + + K + FCKTLTASDTSTHGGFSV R A+ PPLD ++QPP QEL+A D+H EW FRHIFR QP+RHLLT GWSVFVS+K+LVAGD+ +F+ E +L +G+RR R QT MPSSV+SS SMH+G+LA A+HA AT + F+IFY PR S SEF++ ++K Sbjct: 4 SSAASIGPPQPPPPPAPPEEEKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSK 290
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2) HSP 1 Score: 295.434 bits (755), Expect = 2.872e-79 Identity = 154/290 (53.10%), Postives = 194/290 (66.90%), Query Frame = 2 Query: 35 SVMSFAAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQS-EVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 + M+ AAAA + G T A+ ELWHACAGPL +LP G V YFPQGH EQ+ ASM ++++ +PS+ NLPSK++C + NV A+PETDEVYAQ+TL P E + + FCKTLTASDTSTHGGFSV R A+ PPLD S QPP QEL A DLH N W FRHI+R QP+RHLLT GWS+FVS K+L AGD+ IF+R E ++L +G+RR RQ TN+ SSV+SS SMH+G+LA A+HA A + F+IFY PR S +EF++ K Sbjct: 22 TAMAAAAAAAVVGSGCEGEKTKAP--AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAK 309
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 2.058e-77 Identity = 145/271 (53.51%), Postives = 190/271 (70.11%), Query Frame = 2 Query: 92 PTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLP--EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 P G A+ ELWHACAGPL +LP G V YFPQGH EQ+ ASMH+EL+ +LPSK++CK++++ A+ ETDEVYAQ+TL P + D+ + + + + + K FCKTLTASDTSTHGGFSV R A+ PPLD + QPP QEL+A DLH W FRHI+R QP+RHLLT GWSVFVS+K+L+AGD+ +F+R E +L +G+RR R Q + SSV+SS SMH+G+LA A+HA A + F+IFY PR S SEF++ + K Sbjct: 13 PGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQ-NKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAK 282
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 5.988e-77 Identity = 144/271 (53.14%), Postives = 189/271 (69.74%), Query Frame = 2 Query: 92 PTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLP--EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 P G A+ ELWHACAGPL +LP G V YFPQGH EQ+ ASMH+EL+ +LPSK++CK++++ A+ ETDEVY Q+TL P + D+ + + + + + K FCKTLTASDTSTHGGFSV R A+ PPLD + QPP QEL+A DLH W FRHI+R QP+RHLLT GWSVFVS+K+L+AGD+ +F+R E +L +G+RR R Q + SSV+SS SMH+G+LA A+HA A + F+IFY PR S SEF++ + K Sbjct: 13 PGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQ-NKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAK 282
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 285.804 bits (730), Expect = 2.275e-76 Identity = 145/270 (53.70%), Postives = 183/270 (67.78%), Query Frame = 2 Query: 95 TGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTS-PDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 +G + ELWHACAGPL LP G VYYF QGH EQ+ S + Q+P++ NLPS+++C+V NV A+ ++DE+YAQ++L P + +V PD + K FCKTLTASDTSTHGGFSV R A+ PPLD S QPP QELV DLH N W FRHI+R QP+RHLLT GWS+FV SK+L AGD+ +F+R E +L VGVRR RQQT +PSSV+S+ SMH+GVLA A+HA A T F IFY PR +EF++ + K Sbjct: 44 SGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAK 313
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSJ (Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.881e-76 Identity = 144/272 (52.94%), Postives = 187/272 (68.75%), Query Frame = 2 Query: 95 TGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPE-----PEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSV 892 T G+ + ELWHACAGPL LP G VYYFPQGH EQ+ A+ + ++P++ NLPS++LC+V N+ A+ +TDEVYAQ+TL P +++V PIP K FCK LTASDTSTHGGFSV R A+ P LD S QPP QEL+ DLH N W FRHI+R QP+RHLLT GWS+FV +K+L AGD+ +F+R E +L +GVRR RQQT + SSV+S+ SMH+GVLA A+HA ++G+ F+I+Y PRTS S F++ V Sbjct: 29 TQGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVF----PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPV 296
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 285.034 bits (728), Expect = 3.881e-76 Identity = 144/272 (52.94%), Postives = 187/272 (68.75%), Query Frame = 2 Query: 95 TGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPE-----PEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSV 892 T G+ + ELWHACAGPL LP G VYYFPQGH EQ+ A+ + ++P++ NLPS++LC+V N+ A+ +TDEVYAQ+TL P +++V PIP K FCK LTASDTSTHGGFSV R A+ P LD S QPP QEL+ DLH N W FRHI+R QP+RHLLT GWS+FV +K+L AGD+ +F+R E +L +GVRR RQQT + SSV+S+ SMH+GVLA A+HA ++G+ F+I+Y PRTS S F++ V Sbjct: 29 TQGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVF----PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPV 296
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 6.620e-76 Identity = 144/264 (54.55%), Postives = 182/264 (68.94%), Query Frame = 2 Query: 113 ALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQS-EVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 A+ ELWHACAGPL +LP G V YFPQGH EQ+ ASM ++++ +PS+ NLPSK++C + V A+P+TDEVYAQ+TL P E + + + FCKTLTASDTSTHGGFSV R A+ PPLD S QPP QEL A D+H N W FRHI+R QP+RHLLT GWS+FVS K+L AGD+ I +R E +L +G+RR RQ TN+ SSV+SS SMH+GVLA A+HA A + F+IFY PR S +EF++ K Sbjct: 40 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAK 303
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 1.129e-75 Identity = 145/286 (50.70%), Postives = 196/286 (68.53%), Query Frame = 2 Query: 77 ASGGPPTGGSNDA------LYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLP-----EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 +SGG GG + +ELW+ACAGPL +LP +G + YFPQGH EQ+ ASM ++ + Q+PS+ NLPSK++C + +V A+P+TDEVYA++TL P + D+ + + + + + T FCKTLTASDTSTHGGFSV R A+ P LD S QPP QEL A DLH N W FRHI+R QP+RHLLT GWS+FVS K+L+AGD+ +F+R ++L +G+RR RQ TN+ SSV+SS SMH+G+LA A+HA A + F+I+Y PR S SEF++ K Sbjct: 3 SSGGGGGGGEEGEGRGATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQT-EFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAK 287
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 283.108 bits (723), Expect = 1.475e-75 Identity = 138/266 (51.88%), Postives = 184/266 (69.17%), Query Frame = 2 Query: 101 GSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 GS +Y +LW CAGPL +P G++VYYFPQGH+E +EAS +EL + P + PSK+ C+V+ +Q + E +DE YA+ITL+P+ Q + + + P V+SF K LTASDTS HGGFSV +HA +CLPPLDMS+ P QE++A DLHGN+W FRHI+R +RHLLTIGW+ F +SKKLV GD +F+RGE ELRVG+RR QQ N+PSS++S SM G++A A HA +F + YKPR+ S+FIVS +K Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRP---LVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDK 279 The following BLAST results are available for this feature:
BLAST of CK934785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934785 ID=CK934785; Name=CK934785; organism=Citrus sinensis; type=EST; length=900bpback to top |