CK934785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFM_ARATH (Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3) HSP 1 Score: 254.218 bits (648), Expect = 7.337e-67 Identity = 127/263 (48.29%), Postives = 180/263 (68.44%), Query Frame = 2 Query: 116 LYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTI--GWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 +Y +LW+ CAGPL LP G++VYYFPQGH+E +E S EL+ P F+LPSK+ C+VV + R+ + TDEVYAQI+L+ PD +EV + + + + + V+ F K LTASD S GG + ++A +C PPLDMS+ Q LVA DL+G EW+F+H+FR P+RH+ T GWSVF ++K+L+ GD F+ LRGEN ELR G+RR QQ ++PSSVIS++ M GV+A +A T +F++ YKP S S+F++S +K Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLM--PDTTEVMTHNTTM-DTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDK 279
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFC_ARATH (Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 2.135e-66 Identity = 139/298 (46.64%), Postives = 182/298 (61.07%), Query Frame = 2 Query: 44 SFAAAAVPLNHASGGPPTGGSNDA---LYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSE------VTSPDPPIPEPEKC----TVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 S + + P + +S SN A + ELWHACAGPL +LP G V YFPQGH+EQ + + LP + C++++V+ AE TDEVYAQ++LLPE + E + D + E T H FCKTLTASDTSTHGGFSV R A+DC PPLD S+ P QEL+A DLHG EW FRHI+R QPRRHLLT GWS FV+ KKLV+GDA +FLRG++ +LR+GVRR + + S + +M+ + +HAI+T ++FSI Y P+ S S FI+ K Sbjct: 24 SASGSVSPTSSSSASVSVVSSNSAGGGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPK 314
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFC_ORYSJ (Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.166e-62 Identity = 130/282 (46.10%), Postives = 169/282 (59.93%), Query Frame = 2 Query: 71 NHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIP----------EPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 N ASGG + + R+LWHACAGP+ +LP G V Y PQGH+ A E + LP + C+VV+V+ A+ TDEVYA++ L E + E I E + +H FCKTLTASDTSTHGGFSV R A+DC PPLD + P QELVA DLHG +W FRHI+R QPRRHLLT GWS FV+ KKLV+GDA +FLRG++ ELR+GVRR + + SS S + L+ + ++ G++F I Y PR + SE++V Sbjct: 64 NTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA---LPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVV 342
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFN_ORYSJ (Auxin response factor 14 OS=Oryza sativa subsp. japonica GN=ARF14 PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 2.140e-58 Identity = 123/273 (45.05%), Postives = 163/273 (59.71%), Query Frame = 2 Query: 101 GSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVT----SPDPPIPEPEKCTV-------HSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 G+ A+ ELWHACAGP LP G + Y PQ H L A + +P + C+VV V+ RA+ TDEVYA++ L+ E + + + E E C H FCKTLTASDTSTHGGFSV R A+DC PPLD P QEL+A DLHG +W FRHI+R QPRRHLLTIGWS FV+ KKLV+GDA +FLRG++ +LR+GVRR ++ + ++S L +L+ + ++ ++F I + PR+ SEFIV Sbjct: 15 GAAAAVCGELWHACAGPGVALPRRGSALVYLPQAH---LAADGGGGEVPPAGAAAVPPHVACRVVGVELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIV 284
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFW_ARATH (Putative auxin response factor 23 OS=Arabidopsis thaliana GN=ARF23 PE=5 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 5.453e-54 Identity = 105/210 (50.00%), Postives = 140/210 (66.67%), Query Frame = 2 Query: 101 GSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVR 730 GS +Y +LW CAGPL +P G++VYYFPQGH+E +EAS +EL + P+ +LPSK+ C+V+ + + E +DE Y +ITL+P+ Q + + + P V+SF K LTASDTS G FSV +HA +CLPPLDMS+ P QEL+A DLHGN+W F+H +R PR T GW+ F +SKKLV GD +F RGE ELRVG+R Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRP---IVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFH_ORYSJ (Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.433e-47 Identity = 112/292 (38.36%), Postives = 153/292 (52.40%), Query Frame = 2 Query: 92 PTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLP--EPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR---------QQTNMP----------------SSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 P G+ + R+LW ACAG + T+P G VYYFPQGH E EL + +P+ + C+V +V+ A+P+TDEV+A+I L+P + +V E + SF KTLT SD + GGFSV A+ P LD + PP Q +VA D+HG WNFRHI+R PRRHLLT GWS FV+ KKLVAGD+ +FLRG+ +L VG+RR R ++ ++P ++ + L A+ G F + Y PR S EF V Sbjct: 10 PAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELS----AARVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPA-SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV 296
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFJ_ARATH (Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.205e-46 Identity = 114/302 (37.75%), Postives = 151/302 (50.00%), Query Frame = 2 Query: 125 ELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFN---LPSKILCKVVNVQRRAEPETDEVYAQITLLPEP------DQSEVTSPDPPIPEPE---KCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRR------------------------------------HMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 +LWHACAG + +P V+YF QGH E A P F+ +P ILC+VV+V+ A+ ETDEV+A+ITLLP P + V PP + K SF KTLT SD + GGFSV A+ P LD S +PP Q ++A D+HG W FRHI+R PRRHLLT GWS FV+ KKL+AGD+ +FLR E+ +L VG+RR M++ N + ++ + + +A A A G F + Y PR S EF V Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCV 302
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFR_ORYSJ (Auxin response factor 18 OS=Oryza sativa subsp. japonica GN=ARF18 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.590e-45 Identity = 99/217 (45.62%), Postives = 129/217 (59.45%), Query Frame = 2 Query: 104 SNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLP--EPDQSEVTSPDPPIPEPEKCTVH-----SFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRR 733 S+ L +LWHACAG + +P +VYYFPQGH E + H +E P +P+ +LC+V V+ A+P+TDEV+A+I L+P +Q D I SF KTLT SD + GGFSV A+ P LD S PP Q ++A D+HG W FRHI+R PRRHLLT GWS FV+ KKLVAGD+ +F+R EN +L VG+RR Sbjct: 16 SDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQG--HGPVE--FPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRR 228
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFV_ORYSJ (Auxin response factor 22 OS=Oryza sativa subsp. japonica GN=ARF22 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45 Identity = 118/304 (38.82%), Postives = 155/304 (50.99%), Query Frame = 2 Query: 125 ELWHACAGPLATLPCEGQRVYYFPQGHMEQLE-----ASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDP--PI--------PEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQT---------NMP---------------SSVISSH----------SMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 +LWHACAG + +P RVYYF QGH E + A+ EL + LP +LC+V VQ A+ ++DEVYA+I L P P ++E PD P+ P PEK T SF KTLT SD + GGFSV A+ P LD PP Q ++A D+HG W FRHI+R PRRHLLT GWS FV+ KKLVAGD+ +FLR + EL VG+RR R N P S ++ H + + + A+ ++G F + Y PR S +F+V Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPT--SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVV 313
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSJ (Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10 PE=2 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 4.627e-45 Identity = 113/304 (37.17%), Postives = 155/304 (50.99%), Query Frame = 2 Query: 86 GPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPIPEPEKCTVHS------FCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR------------------------QQTNMPSSVISSHSMHLG------VLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 GP G ++ +LW ACAG ++++P G VYYFPQGH EQ A++ + S +P + C+VV V+ A+ E+DEV+A+I L+P P + V + E + +S F KTLT SD + GGFSV A+ P LD S +PP Q + A D+HG EW FRHI+R PRRHLLT GWS FV+ K+L AGD+ +F+R E + VG+RR R + N ++ + G VL A+ A TG F + Y PR S EF V Sbjct: 9 GPTEGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAV------DLSSARVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYPRASTPEFCV 305 The following BLAST results are available for this feature:
BLAST of CK934785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934785 ID=CK934785; Name=CK934785; organism=Citrus sinensis; type=EST; length=900bpback to top |