CK934787

Overview
NameCK934787
Unique NameCK934787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13
Identity = 45/108 (41.67%), Postives = 56/108 (51.85%), Query Frame = 1
Query:  406 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAA------PKSSVKANSQKS 711
            R     + V  V  A  +T  ++K  +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT              +RG  A  NF   TP  A      P S VK   +K+
Sbjct:   98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF-SVTPTTATEKKAPPPSPVKKKKKKN 202          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 45/122 (36.89%), Postives = 59/122 (48.36%), Query Frame = 1
Query:  385 PFTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLS 732
            PF FSAG         + V    ++T     E  R   YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+       +++ P+   S
Sbjct:   67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASS 188          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  481 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 654
            ++RG+RQRPWGKWAAEIRDP++ VRVWLGTF+T              +RG  A++NFP
Sbjct:   86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = 1
Query:  475 KNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQD 789
            + +YRG+R+RPWGK+AAEIRD  K G RVWLGTF+T              +RGK A +NFP E       SS  ANS  S  +             F+YL++S  D
Sbjct:   17 QGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSSSQQVF----------EFEYLDDSVLD 112          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  475 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 660
            K  YRG+RQRPWGK+AAEIRDP  KG RVWLGTF+T              +RG KA VNFP E
Sbjct:  142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLE 204          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  475 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 660
            K  YRG+RQRPWGK+AAEIRDP  KG RVWLGTF+T              +RG KA VNFP E
Sbjct:  135 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLE 197          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  466 RKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 654
            R++  QYRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KAK+NFP
Sbjct:   86 RQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 1
Query:  406 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 678
            R+  GS+AV             ++ ++RG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP ++ +  P
Sbjct:    2 RRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPP 92          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 44/113 (38.94%), Postives = 59/113 (52.21%), Query Frame = 1
Query:  439 VEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNN 777
            V+ A   T      +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP     A   S  ++ SQ S  ++      P+LN   D +++
Sbjct:    5 VKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSF----PNLNLGSDSVSS 113          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  397 SAGRKSHGSTAVKHVEQAKKSTERKRKN----QYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-DETPAAAPKSSVKANSQKSV 714
            S+  + + S++    +Q+ K  ER  +      YRG+R+RPWGK+AAEIRDP  KG R+WLGTF +              +RG+KA +NFP D     AP +S +   +  V
Sbjct:   77 SSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPANSGRKRKRSDV 188          
The following BLAST results are available for this feature:
BLAST of CK934787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CRF2_ARATH3.120e-1341.67Ethylene-responsive transcription factor CRF2 OS=A... [more]
ERF1_TOBAC4.075e-1336.89Ethylene-responsive transcription factor 1 OS=Nico... [more]
CRF1_ARATH5.322e-1355.17Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF97_ARATH9.079e-1341.51Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF5_TOBAC9.079e-1358.73Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_NICSY9.079e-1358.73Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF99_ARATH1.186e-1254.69Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF82_ARATH1.186e-1239.56Ethylene-responsive transcription factor 3 OS=Arab... [more]
ERF76_ARATH1.186e-1238.94Ethylene-responsive transcription factor 11 OS=Ara... [more]
EF106_ARATH1.549e-1237.50Ethylene-responsive transcription factor ERF106 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934787 ID=CK934787; Name=CK934787; organism=Citrus sinensis; type=EST; length=822bp
NCGGCCGGGGATTCACTAGACACTGANNNATCCAAAACTCTCTCAAGCCA
ACAAAAGCAAATTTTTACATTTAACCCATTCTCTTCTAAAAATCTTTTCT
CTTTAGTCCCTGAACAAACCAGAAGAAACGATAAACCCTTAACCATGTGT
GGAGGTGCTATCATTTCGGGCTACATCCCGCCCACCGTGCCGGGCCGTCC
AAAGAAGCTGACGGCGGAGTATCTCTGGCCGGAGCTGAAGAGGTCATCCA
ACAAGAAGTACTCAAAGCCGATCGTCGACGATGATTTCGAGGCTGATTTC
CAAGGATTCAAGGACGATGAAGAAGAGTCTGACATTGATGGTGACGTGGA
CGTTGATGCCGACTTGATGATGGCTGATATTAAGCCTTTTACTTTCTCAG
CTGGTCGCAAGTCTCATGGATCTACAGCCGTGAAGCACGTTGAACAAGCT
AAAAAATCCACAGAAAGAAAGAGGAAGAATCAATATAGGGGAATTAGGCA
GCGTCCATGGGGAAAATGGGCTGCTGAGATCCGTGACCCCACAAAAGGGG
TTCGTGTCTGGCTAGGAACTTTCAATACCGCTGAAGAAGCCGCTAGGGCT
TATGATGCCGAGGCACGGAGGATCCGTGGGAAGAAAGCTAAGGTTAACTT
TCCAGATGAAACTCCTGCTGCTGCTCCAAAGAGCTCAGTGAAGGCAAACT
CTCAGAAATCAGTTCCCAAAGCTTGCCTAAGCCCCGTGCAGCCAAGTTTG
AACCAGAACTTCGATTACTTGAACAACTCCGATCAGGATTACTACAACAA
TGTGAGTATTCTGGAGGAGAAA
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